RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CXorf36Q9H7Y0 433 aa13.06□□□□□ -0.32
CSNK1E-201ENST00000359867 PRDM7Q9NQW5 492 aa13.06□□□□□ -0.32
CSNK1E-201ENST00000359867 RP1P56715 2156 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 BCKDKO14874 412 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 UGT2B11O75310 529 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 JRKO75564 520 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 GCM2O75603 506 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 NADKO95544 446 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 IFNA14P01570 189 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ARAFP10398 606 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 POLR2CP19387 275 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 PPP1CAP62136 330 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 SELENOWP63302 87 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 TUBA1BP68363 451 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 TGM3Q08188 693 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 SMN1Q16637 294 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 SAXO2Q658L1 398 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 MRM1Q6IN84 353 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ZNF793Q6ZN11 406 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 PRR23CQ6ZRP0 262 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 TUBA1AQ71U36 451 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ZNF438Q7Z4V0 828 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 C17orf82Q86X59 251 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 RNF130Q86XS8 419 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 MAL2Q969L2 176 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 KLHL31Q9H511 634 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 TEX10Q9NXF1 929 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ANKMY1Q9P2S6 941 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 TMEFF2Q9UIK5 374 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 KLHL20Q9Y2M5 609 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 RNF215Q9Y6U7 377 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 GSAPA4D1B5 854 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 M0R3G1 203 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ZW10O43264 779 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ERI3O43414 337 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 TNFSF14O43557 240 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 SIGLEC6O43699 453 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ANGPTL1O95841 491 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 HIST1H1TP22492 207 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 PPM1FP49593 454 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 CRYBA2P53672 197 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 KCNJ10P78508 379 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 CDK5R2Q13319 367 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 INAVAQ3KP66 663 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 CRB2Q5IJ48 1285 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 TOR1AIP1Q5JTV8 583 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ZNF691Q5VV52 312 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 SLAMF7Q9NQ25 335 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 NLGN3Q9NZ94 848 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 LRIT1Q9P2V4 623 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 C3orf18Q9UK00 162 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ACSL6Q9UKU0 697 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 ABCG2Q9UNQ0 655 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 PADI2Q9Y2J8 665 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 MAP4K5Q9Y4K4 846 aa13.05□□□□□ -0.32
CSNK1E-201ENST00000359867 FAM221BA6H8Z2 402 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 MYO1GB0I1T2 1018 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 FADS2O95864 444 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ATP5A1P25705 553 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 PSMB9P28065 219 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 DNAJA1P31689 397 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 NCS1P62166 190 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 CDK6Q00534 326 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ZC3H12BQ5HYM0 836 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 CEP78Q5JTW2 689 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 NDUFAF5Q5TEU4 345 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 VTCN1Q7Z7D3 282 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 DEPDC4Q8N2C3 294 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 AMER3Q8N944 861 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 OR4C6Q8NH72 309 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 OR5AK3PQ8NH89 298 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 FLVCR1-AS1Q8TAF5 88 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 RPL3LQ92901 407 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 SLC38A3Q99624 504 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 HOXD1Q9GZZ0 328 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ABCG4Q9H172 646 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 HMG20AQ9NP66 347 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 AKIP1Q9NQ31 210 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ANGPT4Q9Y264 503 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 B3GNT3Q9Y2A9 372 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ASB4Q9Y574 426 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 SNX8Q9Y5X2 465 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 HEATR5BQ9P2D3 2071 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 BMP4P12644 408 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 PRKCAP17252 672 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 FPR1P21462 350 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ITGA1P56199 1179 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 GABARAPL2P60520 117 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 DSTNP60981 165 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 VLDLRP98155 873 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 SLAMF1Q13291 335 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ANKRD13BQ86YJ7 626 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ACOT4Q8N9L9 421 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 NFKBIDQ8NI38 313 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 NT5CQ8TCD5 201 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 EXOSC8Q96B26 276 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 TPD52L3Q96J77 140 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 C7orf34Q96L11 122 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 HRASLS2Q9NWW9 162 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms