RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PPP1R3DO95685 299 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 FGL2Q14314 439 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 TMEM151BQ8IW70 566 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 BBS1Q8NFJ9 593 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 OR5AK2Q8NH90 309 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 SLAMF9Q96A28 289 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 GCM1Q9NP62 436 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 EEDO75530 441 aaKnown RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 LEFTY1O75610 366 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 SQSTM1Q13501 440 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 DEFB134Q4QY38 66 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 PLEKHS1Q5SXH7 462 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 C10orf62Q5T681 223 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 MEX3DQ86XN8 651 aaKnown RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 OR51L1Q8NGJ5 315 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 COQ10AQ96MF6 247 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 SMIM3Q9BZL3 60 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 SLC34A2O95436 690 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 DCNP07585 359 aaKnown RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 RHOP08100 348 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 RHCEP18577 417 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 NDUFV2P19404 249 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 CCINQ13939 588 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 DHCR24Q15392 516 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 RNF111Q6ZNA4 994 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 ZFAND4Q86XD8 727 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 ZNF695Q8IW36 515 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 CNOT9Q92600 299 aaKnown RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 ANKRD33BA6NCL7 494 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 MPPED1O15442 326 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 SORBS2O94875 1100 aaKnown RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 TMEM225BP0DP42 221 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 TIA1P31483 386 aaKnown RBP eCLIP15.29■□□□□ 0.045e-6■■■□□ 15.6
COL18A1-203ENST00000359759 GJA5P36382 358 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 CLECL1Q8IZS7 167 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 TRUB1Q8WWH5 349 aaKnown RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 HYLS1Q96M11 299 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 FNIP2Q9P278 1114 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 IRS2Q9Y4H2 1338 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 TXNL1O43396 289 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 C1GALT1C1LP0DN25 315 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 ETFAP13804 333 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 KCNC1P48547 511 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 TBPL1P62380 186 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 TLE3Q04726 772 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 DLX2Q07687 328 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 UNC50Q53HI1 259 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 METTL2BQ6P1Q9 378 aaKnown RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 Q6ZVL8 140 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 C6orf120Q7Z4R8 191 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 TMEM173Q86WV6 379 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 ELMOD3Q96FG2 381 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 PRR11Q96HE9 360 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 BIRC8Q96P09 236 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 OR51B6Q9H340 312 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 CXXC1Q9P0U4 656 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 PRODH2Q9UF12 536 aa15.29■□□□□ 0.04
COL18A1-203ENST00000359759 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
COL18A1-203ENST00000359759 CRTAPO75718 401 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-203ENST00000359759 FBXO45P0C2W1 286 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 ARAFP10398 606 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 SERINC3Q13530 473 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 FAM214AQ32MH5 1076 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 PAQR8Q8TEZ7 354 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 SCAMP4Q969E2 229 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 CCDC32Q9BV29 185 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 ASB3Q9Y575 518 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 RTCAO00442 366 aaKnown RBP15.28■□□□□ 0.04
COL18A1-203ENST00000359759 CRYZL1O95825 349 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 NUDT7P0C024 238 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 STK19P49842 368 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-203ENST00000359759 GSTM4Q03013 218 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 MEX3BQ6ZN04 569 aaKnown RBP15.28■□□□□ 0.04
COL18A1-203ENST00000359759 DRAXINQ8NBI3 349 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-203ENST00000359759 KCNIP1Q9NZI2 227 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 PMM2O15305 246 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 PRKACBP22694 351 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 FOXK1P85037 733 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 TECRLQ5HYJ1 363 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 LRRC25Q8N386 305 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-203ENST00000359759 FRS2Q8WU20 508 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 C19orf12Q9NSK7 152 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 TMEM100Q9NV29 134 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 COL3A1P02461 1466 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-203ENST00000359759 SH3PXD2BA1X283 911 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 BCAS1O75363 584 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-203ENST00000359759 GRIN2CQ14957 1233 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 RPL13AP3Q6NVV1 102 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.28■□□□□ 0.041e-6■■■□□ 14.9
COL18A1-203ENST00000359759 ARMC1Q9NVT9 282 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 C2orf42Q9NWW7 574 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 SLC22A31A6NKX4 558 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 MEIS3P2A8K0S8 358 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 THBS2P35442 1172 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 TLDC1Q6P9B6 456 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 HAS2Q92819 552 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 COQ4Q9Y3A0 265 aa15.28■□□□□ 0.04
COL18A1-203ENST00000359759 SC5DO75845 299 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 PTPRRQ15256 657 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms