RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 XAGE5Q8WWM1 108 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 KLHL6Q8WZ60 621 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ART5Q96L15 291 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 AMDHD1Q96NU7 426 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TGM7Q96PF1 710 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 BTBD9Q96Q07 612 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 MAP3K3Q99759 626 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 C9orf16Q9BUW7 83 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ADI1Q9BV57 179 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 UGT2B28Q9BY64 529 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 NLNQ9BYT8 704 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 NT5DC2Q9H857 520 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CAPN10Q9HC96 672 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SLC35C2Q9NQQ7 365 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 C1GALT1Q9NS00 363 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 WNT16Q9UBV4 365 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 REV1Q9UBZ9 1251 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 NUP50Q9UKX7 468 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TESMINQ9Y4I5 508 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SNX5Q9Y5X3 404 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CACNA1HO95180 2353 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 PRAMEF27A3QJZ7 478 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 A8MU76 341 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 C2orf74A8MZ97 194 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 K7ESF4 209 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 KPNA4O00629 521 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 AQP9O43315 295 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 PROM1O43490 865 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 DENRO43583 198 aaKnown RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 NDUFA2O43678 99 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 HS6ST1O60243 411 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 GDF9O60383 454 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 DEAF1O75398 565 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 OR6B1O95007 311 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 IFNA14P01570 189 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 CSF2P04141 144 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 ETS2P15036 469 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 PTNP21246 168 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 EPHA2P29317 976 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 PCGF2P35227 344 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 AHRP35869 848 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 DCTP40126 519 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 CXCL12P48061 93 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 SEPHS1P49903 392 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 ARHGDIBP52566 201 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 ARSFP54793 590 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 RPS15AP62244 130 aaKnown RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 KCNJ10P78508 379 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 MAT1AQ00266 395 aaKnown RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 CDK6Q00534 326 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 MAPK11Q15759 364 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 NPTX1Q15818 432 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 DUSP7Q16829 419 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 SYT16Q17RD7 645 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 ADPRMQ3LIE5 342 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 USP53Q70EK8 1073 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 IKBIPQ70UQ0 350 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 SPRED1Q7Z699 444 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 TSEN54Q7Z6J9 526 aaKnown RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 COMTD1Q86VU5 262 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 GATAD2AQ86YP4 633 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 RBM45Q8IUH3 476 aaKnown RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 ELMOD2Q8IZ81 293 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF786Q8N393 782 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 SPEM1Q8N4L4 309 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 C11orf65Q8NCR3 313 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 OR52N2Q8NGI0 321 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 OR9A4Q8NGU2 314 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 DNAJB8Q8NHS0 232 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 GOT1L1Q8NHS2 421 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 MAFAQ8NHW3 353 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 GRPEL2Q8TAA5 225 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 SUN3Q8TAQ9 357 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 SLC38A5Q8WUX1 472 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 TFAP2CQ92754 450 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 MSANTD3Q96H12 275 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 OPALINQ96PE5 141 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 CCDC3Q9BQI4 270 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 BDH2Q9BUT1 245 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 PRR14Q9BWN1 585 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 CHRDQ9H2X0 955 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 EPS8L2Q9H6S3 715 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 UCK1Q9HA47 277 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 CTPS2Q9NRF8 586 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 GPR27Q9NS67 375 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 ZCCHC3Q9NUD5 404 aaKnown RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 TMEM9Q9P0T7 183 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 PILRAQ9UKJ1 303 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 RAB26Q9ULW5 256 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 NAALAD2Q9Y3Q0 740 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 EP300Q09472 2414 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 CNTRLQ7Z7A1 2325 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 KIR2DS5A0A0G2JLQ3 304 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 A0A0G2JNG1 304 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 OR5K3A6NET4 321 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 KIR2DS3K7RE56 304 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF701M0R085 212 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-202ENST00000359366 HMGN4O00479 90 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 SUV39H1O43463 412 aa4.78□□□□□ -1.64
ATXN3-202ENST00000359366 PRKNO60260 465 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms