RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 OR6T1Q8NGN1 323 aa10.56□□□□□ -0.72
SSU72-202ENST00000359060 SLC7A13Q8TCU3 470 aa10.56□□□□□ -0.72
SSU72-202ENST00000359060 UFD1Q92890 307 aa10.56□□□□□ -0.72
SSU72-202ENST00000359060 UCN3Q969E3 161 aa10.56□□□□□ -0.72
SSU72-202ENST00000359060 RELTQ969Z4 430 aa10.56□□□□□ -0.72
SSU72-202ENST00000359060 IFT27Q9BW83 186 aa10.56□□□□□ -0.72
SSU72-202ENST00000359060 MKRN2Q9H000 416 aaKnown RBP10.56□□□□□ -0.72
SSU72-202ENST00000359060 ACSS1Q9NUB1 689 aaPredicted RBP10.56□□□□□ -0.72
SSU72-202ENST00000359060 PHF11Q9UIL8 331 aa10.56□□□□□ -0.72
SSU72-202ENST00000359060 CARD8Q9Y2G2 431 aa10.56□□□□□ -0.72
SSU72-202ENST00000359060 SLC35F4A4IF30 521 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 FAM86C2PA6NEL3 165 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 TRIM64CA6NLI5 447 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 B4DGG1 531 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 H0Y8X5 98 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 ATP5A1P25705 553 aaKnown RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 OPRD1P41143 372 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 SLC15A1P46059 708 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 PGDP52209 483 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 COPZ1P61923 177 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 RELAQ04206 551 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 CCNJQ5T5M9 372 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 C22orf42Q6IC83 251 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 LRRC25Q8N386 305 aaPredicted RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 OR2L3Q8NG85 312 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 GATAD2BQ8WXI9 593 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 BCL7BQ9BQE9 202 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 FAM83CQ9BQN1 747 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 SLAMF7Q9NQ25 335 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 CLEC4AQ9UMR7 237 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 KRBA1A5PL33 1030 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 LRIT2A6NDA9 550 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 POM121BA6NF01 834 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 FABP12A6NFH5 140 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 HMGN4O00479 90 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 GMFGO60234 142 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 PAPLNO95428 1278 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 FUCA1P04066 466 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 CELP19835 753 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 ELAVL4P26378 380 aaKnown RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 VSX2P58304 361 aaPredicted RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 ABHD13Q7L211 337 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 CAMKMTQ7Z624 323 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 LINC00615Q96LM1 132 aaPredicted RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 SLC30A2Q9BRI3 323 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 NEUROG3Q9Y4Z2 214 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 SPTBP11277 2137 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 WWP2O00308 870 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 CCNKO75909 580 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 SOD1P00441 154 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 IMPDH2P12268 514 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 CD72P21854 359 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 KCNJ5P48544 419 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 ZNF91Q05481 1191 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 DEFB110Q30KQ9 67 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 TCTN3Q6NUS6 607 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 DGLUCYQ7Z3D6 616 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 NRMQ8IXM6 262 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 LINC00471Q8N535 108 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 ZNF566Q969W8 418 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 KCTD7Q96MP8 289 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 DOK1Q99704 481 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 SEC14L4Q9UDX3 406 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 PCYT1BQ9Y5K3 369 aaPredicted RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 FNDC1Q4ZHG4 1894 aaPredicted RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 NPIPA5A0A0B4J1W7 369 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 PRSS38A1L453 326 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 CLDN24A6NM45 220 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 NPIPA7E9PJI5 369 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 CTDSP2O14595 271 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 MRPS14O60783 128 aaKnown RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 RAB36O95755 333 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 NPIPA8P0DM63 369 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 IFI30P13284 250 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 GIPRP48546 466 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 HNRNPA0Q13151 305 aaKnown RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 NNATQ16517 81 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 FIGLAQ6QHK4 219 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 SLC16A12Q6ZSM3 486 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 RNF44Q7L0R7 432 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 DEFB119Q8N690 84 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 OR51G2Q8NGK0 314 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 ABHD8Q96I13 439 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 TIMM29Q9BSF4 260 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 LMAN2LQ9H0V9 348 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 GPATCH2Q9NW75 528 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 LYARQ9NX58 379 aaKnown RBP10.55□□□□□ -0.72
SSU72-202ENST00000359060 LIPT1Q9Y234 373 aa10.55□□□□□ -0.72
SSU72-202ENST00000359060 A0A0G2JPF8 293 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 IRGMA1A4Y4 181 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 SERTM1A2A2V5 107 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 HNRNPCL3B7ZW38 293 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 B4GALT2O60909 372 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 NUDT14O95848 222 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 HNRNPCL4P0DMR1 293 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 PBX2P40425 430 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 HYAL2Q12891 473 aa10.54□□□□□ -0.72
SSU72-202ENST00000359060 ELOAQ14241 798 aaKnown RBP10.54□□□□□ -0.72
SSU72-202ENST00000359060 MPEG1Q2M385 716 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms