RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MLLT1Q03111 559 aaPredicted RBP11.91□□□□□ -0.5
GGPS1-202ENST00000358966 GCNT6Q5T4J0 391 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 IRAK1BP1Q5VVH5 260 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 GALNT5Q7Z7M9 940 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 OR9A2Q8NGT5 310 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 KLHL6Q8WZ60 621 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 HTRA1Q92743 480 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 TFAP2CQ92754 450 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 KAT2AQ92830 837 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 MTERF3Q96E29 417 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 NLNQ9BYT8 704 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 CHRDQ9H2X0 955 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 HMG20AQ9NP66 347 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 SLC35C2Q9NQQ7 365 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 EXD2Q9NVH0 621 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 COQ3Q9NZJ6 369 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 CNOT11Q9UKZ1 510 aaKnown RBP11.91□□□□□ -0.5
GGPS1-202ENST00000358966 RAB23Q9ULC3 237 aa11.91□□□□□ -0.5
GGPS1-202ENST00000358966 J3KTA2 159 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 SLC35G6P0C7Q6 338 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 PIGAP37287 484 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 HAAOP46952 286 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 C6orf120Q7Z4R8 191 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 SPPL2AQ8TCT8 520 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 QRFPRQ96P65 431 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 NECAB3Q96P71 396 aaPredicted RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 BBS4Q96RK4 519 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 PITHD1Q9GZP4 211 aaPredicted RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 SAMD4AQ9UPU9 718 aaKnown RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 CAB39Q9Y376 341 aaPredicted RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 TESMINQ9Y4I5 508 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 TECTAO75443 2155 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 TMEM131Q92545 1883 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 PRAMEF27A3QJZ7 478 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 OR2W5A6NFC9 320 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 C12orf71A8MTZ7 269 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 C2orf74A8MZ97 194 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 SCO1O75880 301 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 CSF2P04141 144 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 TTKP33981 857 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 NUDT1P36639 197 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 DCTP40126 519 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 CASP3P42574 277 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 CCT3P49368 545 aaKnown RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 GFERP55789 205 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 RPS15AP62244 130 aaKnown RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 KCNJ10P78508 379 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 CDK6Q00534 326 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 MERTKQ12866 999 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 CDK10Q15131 360 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 TMEM35AQ53FP2 167 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 MRM1Q6IN84 353 aaKnown RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 ZNF600Q6ZNG1 722 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 CBLL1Q75N03 491 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 TSEN54Q7Z6J9 526 aaKnown RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 ZDHHC13Q8IUH4 622 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 ARL14Q8N4G2 192 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 SPEM1Q8N4L4 309 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 OR52J3Q8NH60 311 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 SLC22A18Q96BI1 424 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 ZFYVE21Q9BQ24 234 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 WFDC6Q9BQY6 131 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 EPS8L2Q9H6S3 715 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 ZCCHC3Q9NUD5 404 aaKnown RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 DNAJB9Q9UBS3 223 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 PILRAQ9UKJ1 303 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 SIT1Q9Y3P8 196 aa11.9□□□□□ -0.5
GGPS1-202ENST00000358966 TP53BP1Q12888 1972 aaPredicted RBP11.9□□□□□ -0.5
GGPS1-202ENST00000358966 OR5K3A6NET4 321 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 FAM227AF5H4B4 570 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 K7ESF4 209 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 LDB3O75112 727 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 ALPLP05186 524 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 OR12D1P0DN82 309 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 CYP4B1P13584 511 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 NME1P15531 152 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 PCGF2P35227 344 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 KRT20P35900 424 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 MC3RP41968 323 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 RGS19P49795 217 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 OCA2Q04671 838 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 RUNX2Q13950 521 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 LASP1Q14847 261 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 DUSP7Q16829 419 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 TTC33Q6PID6 262 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 ARMC8Q8IUR7 673 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 METTL27Q8N6F8 245 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 TMEM52Q8NDY8 209 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 SLC38A5Q8WUX1 472 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 ZBED6CLQ96FA7 236 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 C16orf58Q96GQ5 468 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 CCDC120Q96HB5 630 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 SHDQ96IW2 340 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 DEPDC7Q96QD5 511 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 MAP3K3Q99759 626 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 SARGQ9BW04 601 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 QRSL1Q9H0R6 528 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 SMPD3Q9NY59 655 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 MAPRE3Q9UPY8 281 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms