RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 DSC3Q14574 896 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 CNKSR3Q6P9H4 555 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ZNF836Q6ZNA1 936 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 FJX1Q86VR8 437 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 ASCC1Q8N9N2 400 aaKnown RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 SYT14Q8NB59 555 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 GNPDA2Q8TDQ7 276 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 CSPG4P5Q96PW8 444 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 BARX1Q9HBU1 254 aaPredicted RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 POLE4Q9NR33 117 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 PLEKHJ1Q9NW61 149 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 SIDT1Q9NXL6 827 aaKnown RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 MEIS3P1A6NDR6 274 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 H3BQ06 376 aaPredicted RBP9.33□□□□□ -0.92
CHD3-202ENST00000358181 ADGRB1O14514 1584 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 DNAJA2O60884 412 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 IRF2BP2Q7Z5L9 587 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 RDH10Q8IZV5 341 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 TMEM151AQ8N4L1 468 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 PIGCQ92535 297 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 BORCS5Q969J3 196 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 GPR88Q9GZN0 384 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 METTL9Q9H1A3 318 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 PPA2Q9H2U2 334 aa9.33□□□□□ -0.92
CHD3-202ENST00000358181 H7BY64 318 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 FRKP42685 505 aaPredicted RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 GABRA4P48169 554 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 OPCMLQ14982 345 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 PLEKHN1Q494U1 663 aaPredicted RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 CAMKMTQ7Z624 323 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 SH3RF1Q7Z6J0 888 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 TAC4Q86UU9 113 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 MITD1Q8WV92 249 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ATXN2LQ8WWM7 1075 aaKnown RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 TCEAL4Q96EI5 215 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 PRAP1Q96NZ9 151 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 SERINC2Q96SA4 455 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 DCLRE1CQ96SD1 692 aaKnown RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 GABARAPH6UMI1 98 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 GABARAPO95166 117 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 C4BPAP04003 597 aaKnown RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 CD36P16671 472 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ADARB1P78563 741 aaKnown RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 ACY1Q03154 408 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 PPP1R8Q12972 351 aaKnown RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 LAPTM4AQ15012 233 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 LEG1Q6P5S2 330 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ZNF852Q6ZMS4 543 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 LINC00696Q6ZRV3 163 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 PIGWQ7Z7B1 504 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 RAB39BQ96DA2 213 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 SOX17Q9H6I2 414 aaPredicted RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 PLEK2Q9NYT0 353 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 VPS29Q9UBQ0 182 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 NIPSNAP2O75323 286 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ALDH3B2P48448 385 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 FAM110CQ1W6H9 321 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 DAZLQ92904 295 aaKnown RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 CAMK1GQ96NX5 476 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 TMEM248Q9NWD8 314 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 MRPL22Q9NWU5 206 aaKnown RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 C2orf78A6NCI8 922 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 MC2RQ01718 297 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ASRGL1Q7L266 308 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ZFP82Q8N141 532 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 CBR4Q8N4T8 237 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 OR4K14Q8NGD5 310 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ALG3Q92685 438 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 SAR1AQ9NR31 198 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 USP36Q9P275 1121 aaKnown RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 WRAP73Q9P2S5 460 aaPredicted RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 HAS3O00219 553 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 IL1R2P27930 398 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 EDDM3BP56851 147 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ZNF92Q03936 586 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 SLC26A9Q7LBE3 791 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ABHD12BQ7Z5M8 362 aaPredicted RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 OR51A7Q8NH64 312 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ZBED3Q96IU2 234 aaPredicted RBP9.32□□□□□ -0.92
CHD3-202ENST00000358181 RXFP3Q9NSD7 469 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 FAM86C1Q9NVL1 165 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 TCAF1Q9Y4C2 921 aa9.32□□□□□ -0.92
CHD3-202ENST00000358181 ZNF99A8MXY4 864 aaPredicted RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 CAPN3P20807 821 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 NPY1RP25929 384 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 TAF9Q16594 264 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 CDKN3Q16667 212 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 FAM214AQ32MH5 1076 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 ANKRD22Q5VYY1 191 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 TECPR1Q7Z6L1 1165 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 OR2AP1Q8NGE2 309 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 TFAP2BQ92481 460 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 LMAN1LQ9HAT1 526 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 C17orf113A0A1B0GUU1 675 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 RNASET2O00584 256 aaKnown RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 ADRB3P13945 408 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 RAB3BP20337 219 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 HNF1AP20823 631 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 FOXC1Q12948 553 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms