RNA–Protein interactions for RNA: ENST00000356786.9

CCDC88B-202, Transcript of coiled-coil domain containing 88B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC88B, Length 4,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-202ENST00000356786 KCTD18Q6PI47 426 aaPredicted RBP18.6■□□□□ 0.57
CCDC88B-202ENST00000356786 C3orf58Q8NDZ4 430 aa18.6■□□□□ 0.57
CCDC88B-202ENST00000356786 PROKR1Q8TCW9 393 aa18.6■□□□□ 0.57
CCDC88B-202ENST00000356786 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
CCDC88B-202ENST00000356786 DPF3Q92784 378 aa18.6■□□□□ 0.57
CCDC88B-202ENST00000356786 NUBP2Q9Y5Y2 271 aa18.6■□□□□ 0.57
CCDC88B-202ENST00000356786 AHSA1O95433 338 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 GRPRP30550 384 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 TMEM205Q6UW68 189 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 JSRP1Q96MG2 331 aaPredicted RBP18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 DEFB118Q96PH6 123 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 THSD1Q9NS62 852 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 DECR1Q16698 335 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 SPRED1Q7Z699 444 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 MCEMP1Q8IX19 187 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 FAM86B1Q8N7N1 296 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 ECHDC3Q96DC8 303 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 KCNIP3Q9Y2W7 256 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 IRS2Q9Y4H2 1338 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 A6NIN4 97 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 ACOT8O14734 319 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 SLC22A5O76082 557 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 GJB5O95377 273 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 F2P00734 622 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 MAGEA3P43357 314 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 POU6F2P78424 691 aaPredicted RBP18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 FAM180BQ6P0A1 224 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 ZNF565Q8N9K5 539 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 CD200R1Q8TD46 325 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 GLYATL1Q969I3 302 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 FBXL21Q9UKT6 434 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 CLEC4EQ9ULY5 219 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 GXYLT2A0PJZ3 443 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 EMC8O43402 210 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 MAS1P04201 325 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 HES5Q5TA89 166 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 C3P1Q6ZMU1 363 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 NAXEQ8NCW5 288 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 OR5T2Q8NGG2 359 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 RIT1Q92963 219 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 IL17FQ96PD4 163 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 MFFQ9GZY8 342 aa18.59■□□□□ 0.57
CCDC88B-202ENST00000356786 ASGR2P07307 311 aa18.58■□□□□ 0.57
CCDC88B-202ENST00000356786 SMIM18P0DKX4 95 aa18.58■□□□□ 0.57
CCDC88B-202ENST00000356786 CPZQ66K79 652 aa18.58■□□□□ 0.57
CCDC88B-202ENST00000356786 GDF6Q6KF10 455 aaPredicted RBP18.58■□□□□ 0.57
CCDC88B-202ENST00000356786 COMMD6Q7Z4G1 85 aa18.58■□□□□ 0.57
CCDC88B-202ENST00000356786 NRMQ8IXM6 262 aa18.58■□□□□ 0.57
CCDC88B-202ENST00000356786 BIN3Q9NQY0 253 aa18.58■□□□□ 0.57
CCDC88B-202ENST00000356786 EPHA6Q9UF33 1036 aa18.58■□□□□ 0.57
CCDC88B-202ENST00000356786 SOX1O00570 391 aaPredicted RBP18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 SEC13P55735 322 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 TLE2Q04725 743 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 BTN1A1Q13410 526 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 APOFQ13790 326 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 CCL14Q16627 93 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 OCEL1Q9H607 264 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 ASF1BQ9NVP2 202 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 COL18A1P39060 1754 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 ZNF860A6NHJ4 632 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 SLC33A1O00400 549 aaPredicted RBP18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 AMY2AP04746 511 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 SDC1P18827 310 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 MGAT3Q09327 533 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 POU4F2Q12837 409 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 GPR149Q86SP6 731 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 SERPINA11Q86U17 422 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 CPOQ8IVL8 374 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 DNAJC5GQ8N7S2 189 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 ZDHHC1Q8WTX9 485 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 GGHQ92820 318 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 CMKLR1Q99788 373 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 CCDC86Q9H6F5 360 aaKnown RBP18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 PRDM9Q9NQV7 894 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 SPO11Q9Y5K1 396 aa18.58■□□□□ 0.56
CCDC88B-202ENST00000356786 CHRNB1P11230 501 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 HERV-K104P61576 105 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 FRMPD2BQ6IN97 320 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 OTOP2Q7RTS6 562 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 ZNF550Q7Z398 422 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 SNX18Q96RF0 628 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 NT5DC2Q9H857 520 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 USP22Q9UPT9 525 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 C2orf78A6NCI8 922 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 GOSR2O14653 212 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 TNFRSF10BO14763 440 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 CD3GP09693 182 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 CD34P28906 385 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 CRYZQ08257 329 aaKnown RBP18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 CCDC88AQ3V6T2 1871 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 BEST4Q8NFU0 473 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 NT5C3BQ969T7 300 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 SERINC1Q9NRX5 453 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 HPGDSO60760 199 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 SLAMF1Q13291 335 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 TMEM107Q6UX40 140 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 MAVSQ7Z434 540 aa18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 ZNF436Q9C0F3 470 aaPredicted RBP18.57■□□□□ 0.56
CCDC88B-202ENST00000356786 PARPBPQ9NWS1 579 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms