RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 HAT1O14929 419 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 NPC1O15118 1278 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 VEGFDO43915 354 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 REM1O75628 298 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 IFI30P13284 250 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 OSMP13725 252 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 GNSP15586 552 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 CMPK1P30085 196 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 MRPL19P49406 292 aaKnown RBP11.48□□□□□ -0.57
SIRPA-201ENST00000356025 SMIM11AP58511 58 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 SRP54P61011 504 aaKnown RBP11.48□□□□□ -0.57
SIRPA-201ENST00000356025 CD83Q01151 205 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 ZNF91Q05481 1191 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 PLAG1Q6DJT9 500 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 BHLHB9Q6PI77 547 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 NRMQ8IXM6 262 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 NRSN1Q8IZ57 195 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 HMGB4Q8WW32 186 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 PHF21AQ96BD5 680 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 OTUB2Q96DC9 234 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 NECTIN4Q96NY8 510 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 MED20Q9H944 212 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 TRPV5Q9NQA5 729 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 SAGE1Q9NXZ1 904 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 GTF2A1LQ9UNN4 478 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 PCDHGB6Q9Y5F9 930 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 AGAP5A6NIR3 686 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 PRKYO43930 277 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 LAMP2P13473 410 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 KHKP50053 298 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 CDH11P55287 796 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 RACK1P63244 317 aaKnown RBP11.48□□□□□ -0.57
SIRPA-201ENST00000356025 CSNK2BP67870 215 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 ZMAT1Q5H9K5 638 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 HERVK_113Q902F9 699 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 RNFT2Q96EX2 444 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 COQ10AQ96MF6 247 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 SPATA5L1Q9BVQ7 753 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 MS4A8Q9BY19 250 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 ANKMY1Q9P2S6 941 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 NDRG2Q9UN36 371 aaKnown RBP11.48□□□□□ -0.57
SIRPA-201ENST00000356025 CFL2Q9Y281 166 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 LILRB3O75022 631 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 SOX30O94993 753 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 BMP7P18075 431 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 RAB28P51157 221 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 PGDP52209 483 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 DCDC1P59894 354 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 FXNQ16595 210 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 FAHD1Q6P587 224 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 ARL9Q6T311 187 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 MARCH9Q86YJ5 346 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 LAX1Q8IWV1 398 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
SIRPA-201ENST00000356025 YIPF6Q96EC8 236 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 SIPA1Q96FS4 1042 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 SLC27A6Q9Y2P4 619 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 UGT2A1Q9Y4X1 527 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 HSPE1-MOB4S4R3N1 261 aa11.48□□□□□ -0.57
SIRPA-201ENST00000356025 SPAG17Q6Q759 2223 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 DOCK9Q9BZ29 2069 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 HMGN4O00479 90 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 PLD2O14939 933 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 FCMRO60667 390 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 IFNA16P05015 189 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 GYPBP06028 91 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 FUT1P19526 365 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 ELAVL4P26378 380 aaKnown RBP11.47□□□□□ -0.57
SIRPA-201ENST00000356025 TAS2R38P59533 333 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 CXCR4P61073 352 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 RGS1Q08116 209 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 PRRT3Q5FWE3 981 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 SNAP47Q5SQN1 464 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 ACSM5Q6NUN0 579 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 ARMC6Q6NXE6 501 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 SLC46A3Q7Z3Q1 461 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 FBXL6Q8N531 539 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 DENND6BQ8NEG7 585 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 C6orf106Q9H6K1 298 aaPredicted RBP11.47□□□□□ -0.57
SIRPA-201ENST00000356025 AKIP1Q9NQ31 210 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 NDOR1Q9UHB4 597 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 GSTK1Q9Y2Q3 226 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 PPIL1Q9Y3C6 166 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 WDR45Q9Y484 360 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 FAM186AA6NE01 2351 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 A0A0C4DFX4 3053 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 ZC3H12DA2A288 527 aaKnown RBP11.47□□□□□ -0.57
SIRPA-201ENST00000356025 OR2W5A6NFC9 320 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 TRIM64CA6NLI5 447 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 SNTNA6NMZ2 147 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 KIAA0355O15063 1070 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 GUCY1B2O75343 617 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 HOXB2P14652 356 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 HOXB6P17509 224 aaKnown RBP11.47□□□□□ -0.57
SIRPA-201ENST00000356025 PSMA3P25788 255 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 SDC2P34741 201 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 BCL6P41182 706 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 XCR1P46094 333 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 RORCP51449 518 aa11.47□□□□□ -0.57
SIRPA-201ENST00000356025 CSNK1G2P78368 415 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms