RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 ELAC1Q9H777 363 aaKnown RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 UNC80Q8N2C7 3258 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 SHISA3A0PJX4 238 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 H3BUI4 141 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 GABRPO00591 440 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 MAGEB4O15481 346 aaPredicted RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 MT-ND4P03905 459 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 RB1P06400 928 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 PRKAR2AP13861 404 aaKnown RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 SHC1P29353 583 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 PPP2R1BP30154 601 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 OC90Q02509 493 aaPredicted RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 MSANTD1Q6ZTZ1 278 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 VN1R5Q7Z5H4 357 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 ZNF655Q8N720 491 aaPredicted RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 SLC38A2Q96QD8 506 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 ZNF607Q96SK3 696 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 PAK6Q9NQU5 681 aaPredicted RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 TDP1Q9NUW8 608 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 KCNN3Q9UGI6 736 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 PDPK1O15530 556 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 GALTP07902 379 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 KELP23276 732 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 DNASE1P24855 282 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 STOMP27105 288 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 PSMB5P28074 263 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 AHRP35869 848 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 AGFG1P52594 562 aaKnown RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 ACLYP53396 1101 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 GGTA1PQ4G0N0 100 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 RAET1GQ6H3X3 334 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 LAMTOR1Q6IAA8 161 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 ZNF767PQ75MW2 155 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 PRSS45Q7RTY3 260 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 KANSL1Q7Z3B3 1105 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 ZNF680Q8NEM1 530 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 OR2T35Q8NGX2 323 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 RELTQ969Z4 430 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 HYLS1Q96M11 299 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 TREX2Q9BQ50 279 aaPredicted RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 THAP7Q9BT49 309 aaPredicted RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 OSGEPL1Q9H4B0 414 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 DDX31Q9H8H2 851 aaKnown RBP12.86□□□□□ -0.35
TRIM4-203ENST00000355947 TAC3Q9UHF0 121 aa12.86□□□□□ -0.35
TRIM4-203ENST00000355947 SCN3AQ9NY46 2000 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 TEX13CA0A0J9YWL9 993 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 A0A1W2PRU2 124 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 H7BY64 318 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 SOCS6O14544 535 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 RFPL3O75679 317 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 ALPPP05187 535 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 AP2S1P53680 142 aaPredicted RBP12.85□□□□□ -0.35
TRIM4-203ENST00000355947 RASGEF1AQ8N9B8 481 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 SLC43A3Q8NBI5 491 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 CHTF18Q8WVB6 975 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 RFT1Q96AA3 541 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 PRAP1Q96NZ9 151 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 OR51I1Q9H343 314 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 THSD1Q9NS62 852 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 WSB2Q9NYS7 404 aaPredicted RBP12.85□□□□□ -0.35
TRIM4-203ENST00000355947 RASD1Q9Y272 281 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 LSM2Q9Y333 95 aaKnown RBP12.85□□□□□ -0.35
TRIM4-203ENST00000355947 DOCK6Q96HP0 2047 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 ATG13O75143 517 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 SLC22A5O76082 557 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 FUT1P19526 365 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 SLC6A11P48066 632 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 MLIPQ5VWP3 458 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 C22orf39Q6P5X5 142 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
TRIM4-203ENST00000355947 BHLHE41Q9C0J9 482 aaPredicted RBP12.85□□□□□ -0.35
TRIM4-203ENST00000355947 IMP3Q9NV31 184 aaKnown RBP12.85□□□□□ -0.35
TRIM4-203ENST00000355947 OR6C2Q9NZP2 312 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 TAAR2Q9P1P5 351 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 REV1Q9UBZ9 1251 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 PATJQ8NI35 1801 aa12.85□□□□□ -0.35
TRIM4-203ENST00000355947 TRBV5-4A0A0C4DH59 114 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 A0A1W2PRG6 482 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ARHGDIBP52566 201 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 CLDN2P57739 230 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 TMEM115Q12893 351 aaPredicted RBP12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ILKQ13418 452 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 MRPL58Q14197 206 aaKnown RBP12.84□□□□□ -0.35
TRIM4-203ENST00000355947 PLK5Q496M5 336 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 PIP5KL1Q5T9C9 394 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 MEDAGQ5VYS4 303 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 RPTNQ6XPR3 784 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SERPINA12Q8IW75 414 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 GPR135Q8IZ08 494 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 OR51L1Q8NGJ5 315 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ORAI1Q96D31 301 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SENP5Q96HI0 755 aaPredicted RBP12.84□□□□□ -0.35
TRIM4-203ENST00000355947 CHST8Q9H2A9 424 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ISG20L2Q9H9L3 353 aaKnown RBP12.84□□□□□ -0.35
TRIM4-203ENST00000355947 MRPL39Q9NYK5 338 aaKnown RBP12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ADAM30Q9UKF2 790 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 FAAHO00519 579 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 GYPBP06028 91 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms