RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 A0A1B0GTW7 788 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 UBE2QL1A1L167 161 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF195O14628 629 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 AQP9O43315 295 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 PLOD3O60568 738 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF542PQ5EBM4 170 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 AGBL4Q5VU57 503 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 USP43Q70EL4 1123 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 CBLL1Q75N03 491 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 HSPA12BQ96MM6 686 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF578Q96N58 590 aaPredicted RBP11.51□□□□□ -0.57
SMAD9-201ENST00000350148 EBF1Q9UH73 591 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ERVK-11Q9UQG0 969 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 TTC3P53804 2025 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 EFCAB9A8MZ26 197 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ANHXE9PGG2 379 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 TSPAN12O95859 305 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 UGT2B7P16662 529 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ITGB8P26012 769 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 CERS1P27544 350 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 THRSPQ92748 146 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 PLAC1Q9HBJ0 212 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 AGPAT4Q9NRZ5 378 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 SEC14L4Q9UDX3 406 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 EXOSC1Q9Y3B2 195 aaKnown RBP11.51□□□□□ -0.57
SMAD9-201ENST00000350148 AIREO43918 545 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 MAZP56270 477 aaKnown RBP11.51□□□□□ -0.57
SMAD9-201ENST00000350148 SHC2P98077 582 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 CLCA4Q14CN2 919 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 WASH2PQ6VEQ5 465 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF595Q8IYB9 648 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 PRSS58Q8IYP2 241 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 MCFD2Q8NI22 146 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 OR52A5Q9H2C5 316 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 WASH6PQ9NQA3 447 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 PEX16Q9Y5Y5 336 aa11.51□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF860A6NHJ4 632 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 POLR1CO15160 346 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SBK3P0C264 359 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 RAB38P57729 211 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 KCNAB2Q13303 367 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF551Q7Z340 670 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 VN1R5Q7Z5H4 357 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 NAGSQ8N159 534 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SNX33Q8WV41 574 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 BMFQ96LC9 184 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SLC6A16Q9GZN6 736 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SACM1LQ9NTJ5 587 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 OLAHQ9NV23 265 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 MCUBQ9NWR8 336 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SERTM1A2A2V5 107 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 ISPDA4D126 451 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 HTR3EA5X5Y0 456 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 OR7A10O76100 309 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 KDM4BO94953 1096 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 AFF3P51826 1226 aaKnown RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 HTR4Q13639 388 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 EIF2S3LQ2VIR3 472 aaKnown RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 CEP76Q8TAP6 659 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 NETO1Q8TDF5 533 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 BTBD2Q9BX70 525 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SEMA6CQ9H3T2 930 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 EXO5Q9H790 373 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 PPT2Q9UMR5 302 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 A8MUA0 341 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 LOC110117498-PIK3R3F6TDL0 507 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 YES1P07947 543 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 TACSTD2P09758 323 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 ARAFP10398 606 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 HNRNPFP52597 415 aaKnown RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 GAS6Q14393 721 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 FAM110BQ8TC76 370 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 ASPNQ9BXN1 380 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 C1GALT1Q9NS00 363 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SLC17A4Q9Y2C5 497 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 FURINP09958 794 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 HK1P19367 917 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 GMFBP60983 142 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 EXOC3L2Q2M3D2 409 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 YOD1Q5VVQ6 348 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 TMCO6Q96DC7 493 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 C1GALT1C1Q96EU7 318 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 OR8D2Q9GZM6 311 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 TUBB1Q9H4B7 451 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 PTGES2Q9H7Z7 377 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 MBNL1Q9NR56 388 aaKnown RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SIP14410 1827 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 CLIC3O95833 236 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 PABPC4LP0CB38 370 aaKnown RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 TAS2R43P59537 309 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 DCAF7P61962 342 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 CSNK1G2P78368 415 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 PDSS1Q5T2R2 415 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 MLIPQ5VWP3 458 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 KLHL24Q6TFL4 600 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 ENPP6Q6UWR7 440 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 ERI1Q8IV48 349 aaKnown RBP11.5□□□□□ -0.57
SMAD9-201ENST00000350148 SLC22A8Q8TCC7 542 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 PHOSPHO1Q8TCT1 267 aa11.5□□□□□ -0.57
SMAD9-201ENST00000350148 CDADC1Q9BWV3 514 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms