RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SPATA5L1Q9BVQ7 753 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ACTRT3Q9BYD9 372 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 ING2Q9H160 280 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 DUSP15Q9H1R2 295 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 SLC38A1Q9H2H9 487 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 RIBC2Q9H4K1 309 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 DUSP21Q9H596 190 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PAPOLBQ9NRJ5 636 aaKnown RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 RLIMQ9NVW2 624 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 CALML5Q9NZT1 146 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 PTGFRNQ9P2B2 879 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 TRPC4Q9UBN4 977 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 C19orf53Q9UNZ5 99 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 POFUT2Q9Y2G5 429 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 FAM32AQ9Y421 112 aaKnown RBP6.49□□□□□ -1.37
TRIM55-203ENST00000350034 COMMD3-BMI1R4GMX3 469 aa6.49□□□□□ -1.37
TRIM55-203ENST00000350034 USP9XQ93008 2570 aaPredicted RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 CCDC163A0A0D9SF12 145 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 TRBV4-1A0A0J9YWV2 114 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 A0A1W2PRQ8 180 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 FITM1A5D6W6 292 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF860A6NHJ4 632 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 TRIM64BA6NI03 449 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SLC9B1P1A6NJY1 282 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 DUXAA6NLW8 204 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SLC1A7O00341 560 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PCDH17O14917 1159 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 B4GAT1O43505 415 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 FOXS1O43638 330 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 AHCYL1O43865 530 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 FGF17O60258 216 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 MRPS14O60783 128 aaKnown RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 WBP4O75554 376 aaKnown RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 GADD45GO95257 159 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 MED26O95402 600 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 OXSR1O95747 527 aaPredicted RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 AGR2O95994 175 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 ADAP00813 363 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 EIF2S1P05198 315 aaKnown RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 H1F0P07305 194 aaKnown RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 CTSBP07858 339 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 GABRB1P18505 474 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 CDH3P22223 829 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 GSTT1P30711 240 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 GGT2P36268 569 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PRKAG1P54619 331 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 EMP3P54852 163 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 TPD52P55327 224 aaPredicted RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SMIM11AP58511 58 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 CSNK2BP67870 215 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 OLR1P78380 273 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 IGLV3-21P80748 117 aaPredicted RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PMS2P3Q13401 168 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 LSAMPQ13449 338 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 DGCR6Q14129 220 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 FAM214AQ32MH5 1076 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 C14orf28Q4W4Y0 310 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 C6orf132Q5T0Z8 1188 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 GARNL3Q5VVW2 1013 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 BROXQ5VW32 411 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 GTF2IRD2BQ6EKJ0 949 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 XAF1Q6GPH4 301 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 NIPAL1Q6NVV3 410 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 ZCCHC12Q6PEW1 402 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 FAM111BQ6SJ93 734 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 KCTD8Q6ZWB6 473 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 OLIG3Q7RTU3 272 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 B3GNT8Q7Z7M8 397 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 GTF2IRD2Q86UP8 949 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 LACC1Q8IV20 430 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 OR4N5Q8IXE1 308 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 TMEFF1Q8IYR6 380 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SPARTQ8N0X7 666 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SHISA5Q8N114 240 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 CARFQ8N187 725 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 OR5T3Q8NGG3 340 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SGCDQ92629 289 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 MAGED4Q96JG8 741 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SPACA7Q96KW9 195 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 ALPK1Q96QP1 1244 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SIGLEC11Q96RL6 698 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 CD180Q99467 661 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 TSC22D3Q99576 134 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 DOK1Q99704 481 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 MAP3K3Q99759 626 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 ARHGDIGQ99819 225 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 NIPSNAP1Q9BPW8 284 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 YIPF4Q9BSR8 244 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PINK1Q9BXM7 581 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PIGUQ9H490 435 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 ERVMER34-1Q9H9K5 563 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 POLR1BQ9H9Y6 1135 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 NMNAT1Q9HAN9 279 aaPredicted RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PAK1IP1Q9NWT1 392 aaPredicted RBP6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PTTG2Q9NZH5 202 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 MAT2BQ9NZL9 334 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SEMA5BQ9P283 1151 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 KIF17Q9P2E2 1029 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SEC14L3Q9UDX4 400 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 BLOC1S6Q9UL45 172 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms