RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SIGLEC6O43699 453 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 KDM4BO94953 1096 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 APOL3O95236 402 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 SFTPCP11686 197 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 HSD3B1P14060 373 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 PORP16435 677 aaPredicted RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ACRV1P26436 265 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 HSD3B2P26439 372 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 CCL11P51671 97 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 GALNT1Q10472 559 aaPredicted RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 MYBPHQ13203 477 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ANKDD1AQ495B1 522 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 IQCCQ4KMZ1 466 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 DPPA4Q7L190 304 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM17Q86X19 198 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 RNF130Q86XS8 419 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF676Q8N7Q3 588 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 PEX11GQ96HA9 241 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 TEX37Q96LM6 180 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 BIRC8Q96P09 236 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ATOH8Q96SQ7 321 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ZIC5Q96T25 663 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 BARD1Q99728 777 aaKnown RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 DOHHQ9BU89 302 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 OR51V1Q9H2C8 321 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 KCNK12Q9HB15 430 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 SMURF1Q9HCE7 757 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 OARD1Q9Y530 152 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 NPPAP01160 153 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 FGF4P08620 206 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ATXN1LP0C7T5 689 aaKnown RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 DRD2P14416 443 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 SLC6A6P31641 620 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 SPINT3P49223 89 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 GBX2P52951 348 aaPredicted RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 SMARCD3Q6STE5 483 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 FUNDC1Q8IVP5 155 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF283Q8N7M2 679 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 CNEP1R1Q8N9A8 125 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 NDNFQ8TB73 568 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 SPRYD4Q8WW59 207 aaPredicted RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ACOT12Q8WYK0 555 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 RAB8BQ92930 207 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 CST11Q9H112 138 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 TM7SF3Q9NS93 570 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 DNAJC27Q9NZQ0 273 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM9Q9P0T7 183 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 COMMD3Q9UBI1 195 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ACSL6Q9UKU0 697 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 RNF6Q9Y252 685 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 MMP2P08253 660 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 MTHFD2P13995 350 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 CD40LGP29965 261 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ESCO2Q56NI9 601 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 IER5LQ5T953 404 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 GRAMD2AQ8IUY3 354 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 TSPEARQ8WU66 669 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 APIPQ96GX9 242 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ZBTB20Q9HC78 741 aaPredicted RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 CSNK1G1Q9HCP0 422 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 TM9SF3Q9HD45 589 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 MMP17Q9ULZ9 603 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 LIPT1Q9Y234 373 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ANKRD28O15084 1053 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 APLNRP35414 380 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 OR3A3P47888 321 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 OR3A2P47893 321 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF763Q0D2J5 394 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 SEMA3BQ13214 749 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 SGCAQ16586 387 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 C5orf22Q49AR2 442 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ABCA11PQ4W5N1 156 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 CARM1Q86X55 608 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 MRPL41Q8IXM3 137 aaKnown RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 OR2T11Q8NH01 316 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 UBXN10Q96LJ8 280 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 TBX5Q99593 518 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 OLAHQ9NV23 265 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 POLHQ9Y253 713 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 NOP16Q9Y3C1 178 aaKnown RBP10.34□□□□□ -0.75
CLCN6-202ENST00000346436 PEX16Q9Y5Y5 336 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 HS3ST3A1Q9Y663 406 aa10.34□□□□□ -0.75
CLCN6-202ENST00000346436 ISPDA4D126 451 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 CPSF4LA6NMK7 179 aaKnown RBP10.33□□□□□ -0.75
CLCN6-202ENST00000346436 HHLA1C9JL84 531 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 M0R129 80 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 EIF3FO00303 357 aaPredicted RBP10.33□□□□□ -0.75
CLCN6-202ENST00000346436 MAOBP27338 520 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 SMSP52788 366 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 CRTC2Q53ET0 693 aaPredicted RBP10.33□□□□□ -0.75
CLCN6-202ENST00000346436 THOC7Q6I9Y2 204 aaKnown RBP10.33□□□□□ -0.75
CLCN6-202ENST00000346436 PAMR1Q6UXH9 720 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 PRICKLE2Q7Z3G6 844 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 ADAMTS19Q8TE59 1207 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 GAB3Q8WWW8 586 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 RELTQ969Z4 430 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 POLR2J3Q9H1A7 115 aaKnown RBP10.33□□□□□ -0.75
CLCN6-202ENST00000346436 C14orf119Q9NWQ9 140 aa10.33□□□□□ -0.75
CLCN6-202ENST00000346436 FAM120CQ9NX05 1096 aaKnown RBP10.33□□□□□ -0.75
CLCN6-202ENST00000346436 HAT1O14929 419 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms