RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 BLOC1S5-TXNDC5H3BN57 136 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 RNASET2O00584 256 aaKnown RBP12.55□□□□□ -0.4
CASC4-202ENST00000345795 IFI30P13284 250 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 DCDC1P59894 354 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 CMPK2Q5EBM0 449 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 PLEKHG7Q6ZR37 379 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 PEX5LQ8IYB4 626 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 OR4K14Q8NGD5 310 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 ADAMTS16Q8TE57 1224 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 PTCHD1Q96NR3 888 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 CCDC115Q96NT0 180 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 LMAN1LQ9HAT1 526 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 ETAA1Q9NY74 926 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 DHCR7Q9UBM7 475 aaKnown RBP12.55□□□□□ -0.4
CASC4-202ENST00000345795 ENPP4Q9Y6X5 453 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 SPINT1O43278 529 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 MFN2O95140 757 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 CFIP05156 583 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 FHP07954 510 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 NAA10P41227 235 aaPredicted RBP12.55□□□□□ -0.4
CASC4-202ENST00000345795 ADARB1P78563 741 aaKnown RBP12.55□□□□□ -0.4
CASC4-202ENST00000345795 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
CASC4-202ENST00000345795 TOMM20Q15388 145 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 RBM48Q5RL73 367 aaKnown RBP12.55□□□□□ -0.4
CASC4-202ENST00000345795 MTFR2Q6P444 385 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 ENTHD1Q8IYW4 607 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 ZNF655Q8N720 491 aaPredicted RBP12.55□□□□□ -0.4
CASC4-202ENST00000345795 OR52P1PQ8NH57 321 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 ZFPM2Q8WW38 1151 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 DMRTB1Q96MA1 342 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 SLC6A18Q96N87 628 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 BRF2Q9HAW0 419 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 SNX7Q9UNH6 387 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 ICKQ9UPZ9 632 aa12.55□□□□□ -0.4
CASC4-202ENST00000345795 HNRNPCL2B2RXH8 293 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 H0YAE9 185 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 MAGEB4O15481 346 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 GNSP15586 552 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 HNRNPA2B1P22626 353 aaKnown RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 CHMP24386 653 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 TTKP33981 857 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 KHKP50053 298 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 ISL1P61371 349 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 KCNJ10P78508 379 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 SUZ12Q15022 739 aaKnown RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 C22orf42Q6IC83 251 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 FAM71E1Q6IPT2 247 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 AMER2Q8N7J2 671 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 ZNF433Q8N7K0 673 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 ABHD11Q8NFV4 315 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 ZNF563Q8TA94 476 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 SLC7A13Q8TCU3 470 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 PCBD2Q9H0N5 130 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 ANKHQ9HCJ1 492 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 CNOT11Q9UKZ1 510 aaKnown RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 GPR34Q9UPC5 381 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 MRPS2Q9Y399 296 aaKnown RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 CORINQ9Y5Q5 1042 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 ZNF236Q9UL36 1845 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 HCN1O60741 890 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 RPP14O95059 124 aaKnown RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 TNFP01375 233 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 APOA1P02647 267 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 AHRP35869 848 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 DHPSP49366 369 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 COPZ1P61923 177 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 BNC1Q01954 994 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 SLC3A1Q07837 685 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 LARS2Q15031 903 aaKnown RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 ARL9Q6T311 187 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 SLC37A2Q8TED4 501 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 GAB3Q8WWW8 586 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 CNRIP1Q96F85 164 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 MGLLQ99685 303 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 TM9SF2Q99805 663 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 POLMQ9NP87 494 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 ACTR10Q9NZ32 417 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 YARS2Q9Y2Z4 477 aaKnown RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 ROS1P08922 2347 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 LRIT2A6NDA9 550 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 LRRN3E7EW58 273 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 H0YGG7 62 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 CRISP1P54107 249 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 ARF3P61204 181 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 TUBA4AP68366 448 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 LRIT3Q3SXY7 679 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 ZNF57Q68EA5 555 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 UNC5DQ6UXZ4 953 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 TMPRSS9Q7Z410 1059 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 EFHD2Q96C19 240 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 GFM1Q96RP9 751 aaKnown RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 ZNF559Q9BR84 538 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 LRRN3Q9H3W5 708 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 TMEFF2Q9UIK5 374 aaPredicted RBP12.54□□□□□ -0.4
CASC4-202ENST00000345795 POFUT2Q9Y2G5 429 aa12.54□□□□□ -0.4
CASC4-202ENST00000345795 CLDN25C9JDP6 229 aa12.53□□□□□ -0.4
CASC4-202ENST00000345795 CASC3O15234 703 aaKnown RBP12.53□□□□□ -0.4
CASC4-202ENST00000345795 TSC22D2O75157 780 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms