RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 C10orf62Q5T681 223 aaPredicted RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 AADACL2Q6P093 401 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MED27Q6P2C8 311 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 FBXL16Q8N461 479 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 PARP16Q8N5Y8 322 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ZMIZ2Q8NF64 920 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 GPR151Q8TDV0 419 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MARC2Q969Z3 335 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 PKMYT1Q99640 499 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MACROD1Q9BQ69 325 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 VAPAQ9P0L0 249 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 OR2AG2A6NM03 316 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 AGPSO00116 658 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SCGB1C2P0DMR2 95 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 CETPP11597 493 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SOX3P41225 446 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 CCR8P51685 355 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 GRB2P62993 217 aaKnown RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 NPRL3Q12980 569 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SLAMF1Q13291 335 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 GRB10Q13322 594 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 GRHL3Q8TE85 626 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 ALG3Q92685 438 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 FKBP10Q96AY3 582 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 ZNF681Q96N22 645 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 OR7D2Q96RA2 312 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 MCCC2Q9HCC0 563 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SLC2A8Q9NY64 477 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 PKD1L3Q7Z443 1732 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 ZNF726A6NNF4 738 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 EIF3FO00303 357 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 CD1EP15812 388 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 KIAA0141Q14154 515 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 SLC10A1Q14973 349 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 PDE12Q6L8Q7 609 aaKnown RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 PARGQ86W56 976 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 CAMKVQ8NCB2 501 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 NAXEQ8NCW5 288 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 KREMEN1Q96MU8 473 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 RRAGCQ9HB90 399 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 FZD3Q9NPG1 666 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 IL17RBQ9NRM6 502 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 BTG4Q9NY30 223 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 EPHA6Q9UF33 1036 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 A0A087X0M5 115 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 A0A1B0GX30 115 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 A8MVM7 634 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 M0R143 59 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 FAM155BO75949 473 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 NFAT5O94916 1531 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 CDK14O94921 469 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 RPLP1P05386 114 aaKnown RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 ADH5P11766 374 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 UBE2G2P60604 165 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 TMEM62Q0P6H9 643 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 RTL6Q6ICC9 239 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 TNFAIP8L2Q6P589 184 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 UQCC3Q6UW78 93 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 GPR142Q7Z601 462 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 GALNT10Q86SR1 603 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 PHF13Q86YI8 300 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 SLC43A2Q8N370 569 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 UBAC2Q8NBM4 344 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 MGLLQ99685 303 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 B3GAT2Q9NPZ5 323 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 KNDC1Q76NI1 1749 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 COL15A1P39059 1388 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 UMAD1C9J7I0 102 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SOCS2O14508 198 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SCAMP3O14828 347 aaKnown RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 GPR137BO60478 399 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 KITLGP21583 273 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 FUT4P22083 530 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 HTR2CP28335 458 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SLC6A6P31641 620 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 S100A11P31949 105 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 HCAR3P49019 387 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 LCN6P62502 163 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 MFGE8Q08431 387 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 ODF4Q2M2E3 257 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 PXDC1Q5TGL8 231 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 NPNTQ6UXI9 565 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 ABHD13Q7L211 337 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 IL17REQ8NFR9 667 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SLC2A14Q8TDB8 520 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 SH3YL1Q96HL8 342 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 ZNF668Q96K58 619 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 ZNF582Q96NG8 517 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 UHRF2Q96PU4 802 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 ZDHHC5Q9C0B5 715 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 METTL17Q9H7H0 456 aaPredicted RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 IMP3Q9NV31 184 aaKnown RBP5.9□□□□□ -1.46
VCAN-203ENST00000343200 GJD2Q9UKL4 321 aa5.9□□□□□ -1.46
VCAN-203ENST00000343200 FAM221BA6H8Z2 402 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 FAAHO00519 579 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 CD48P09326 243 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 DLDP09622 509 aaKnown RBP5.9□□□□□ -1.47
VCAN-203ENST00000343200 ZNF44P15621 663 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 DRD5P21918 477 aa5.9□□□□□ -1.47
VCAN-203ENST00000343200 MEOX2P50222 304 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms