RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ADAM8P78325 824 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 HOXC5Q00444 222 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 HSF2Q03933 536 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ARHGAP19Q14CB8 494 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 YIPF7Q8N8F6 280 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ACOT4Q8N9L9 421 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 FAM46AQ96IP4 442 aaKnown RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 TOX2Q96NM4 488 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.82□□□□□ -1.32
VCAN-202ENST00000342785 CENPMQ9NSP4 180 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 ZNF224Q9NZL3 707 aa6.82□□□□□ -1.32
VCAN-202ENST00000342785 A0A1B0GVT2 93 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CD8B2A6NJW9 211 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CSTAP01040 98 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 GSTT2BP0CG30 244 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CD8BP10966 210 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 TCEA1P23193 301 aaKnown RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 PSMB5P28074 263 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 ZNF91Q05481 1191 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 PUM1Q14671 1186 aaKnown RBP eCLIP6.81□□□□□ -1.32
VCAN-202ENST00000342785 DNAJC22Q8N4W6 341 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 HORMAD2Q8N7B1 307 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 KLHL31Q9H511 634 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 MTHFD2LQ9H903 347 aaPredicted RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 ASIC5Q9NY37 505 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 SLC25A37Q9NYZ2 338 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CNOT2Q9NZN8 540 aaKnown RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 PCDHGA4Q9Y5G9 962 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 EVPLQ92817 2033 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 STRCP1A6NGW2 1772 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 A0A1W2PQ72 361 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 SLC22A31A6NKX4 558 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 PRODHO43272 600 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 KLF8O95600 359 aaPredicted RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 B3GALT4O96024 378 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CYP17A1P05093 508 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CHMP24386 653 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 MC3RP41968 323 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 LRIF1Q5T3J3 769 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 ANKRD34AQ69YU3 496 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 TMEM53Q6P2H8 277 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 PLBD1Q6P4A8 553 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 ZCCHC12Q6PEW1 402 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 OR2L2Q8NH16 312 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 BADQ92934 168 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 TREX2Q9BQ50 279 aaPredicted RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 TTYH2Q9BSA4 534 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 TRIM2Q9C040 744 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 SACM1LQ9NTJ5 587 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 TRAV6A0A075B6T7 132 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 C12orf71A8MTZ7 269 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 J3KTA2 159 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CLEC3AO75596 197 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 JUNBP17275 347 aaPredicted RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 C5AR1P21730 350 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 MAP4K2Q12851 820 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 ODF4Q2M2E3 257 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 NUP54Q7Z3B4 507 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 MEX3DQ86XN8 651 aaKnown RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 TIGD4Q8IY51 512 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 TSTD1Q8NFU3 115 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 LTBP4Q8N2S1 1624 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 A0A1W2PRG6 482 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 H3BSH0 61 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 GABARAPO95166 117 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CAPNS1P04632 268 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CERS1P27544 350 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CD97P48960 835 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 GPALPP1Q8IXQ4 340 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 TP63Q9H3D4 680 aaPredicted RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 TAS2R10Q9NYW0 307 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 PPT2Q9UMR5 302 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 NHSQ6T4R5 1651 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 HIDE1A8MVS5 230 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 GNSP15586 552 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 MAP3K8P41279 467 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CRYZQ08257 329 aaKnown RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 ZNF542PQ5EBM4 170 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 OLFML2AQ68BL7 652 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 DESI1Q6ICB0 168 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 MS4A15Q8N5U1 240 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 GATSQ8NAP1 163 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CHPT1Q8WUD6 406 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 NKD1Q969G9 470 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 RFT1Q96AA3 541 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 IL37Q9NZH6 218 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 TRAPPC13A5PLN9 417 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 C2orf74A8MZ97 194 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 ZNF670-ZNF695F2Z2N8 137 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 FOXE1O00358 373 aaPredicted RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 EEF1E1O43324 174 aaKnown RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 BMP4P12644 408 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CEBPBP17676 345 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 PFN3P60673 137 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 PRDX1Q06830 199 aaKnown RBP6.81□□□□□ -1.32
VCAN-202ENST00000342785 ZNF550Q7Z398 422 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 ZNF527Q8NB42 609 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CYB561A3Q8NBI2 242 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 SAMD8Q96LT4 415 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 ACTRT3Q9BYD9 372 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms