RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SEMA7AO75326 666 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 CCNB2O95067 398 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 EPPINO95925 133 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 GIMD1P0DJR0 217 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 ANXA8P13928 327 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 ALDH3B2P48448 385 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 FOXD4Q12950 439 aaPredicted RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 NPRL3Q12980 569 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 RBM48Q5RL73 367 aaKnown RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 C6orf141Q5SZD1 244 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 HEPHL1Q6MZM0 1159 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 OR9Q2Q8NGE9 314 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 PHF10Q8WUB8 498 aaKnown RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 SLC9A6Q92581 669 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 CD180Q99467 661 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 RBCK1Q9BYM8 510 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 YIPF3Q9GZM5 350 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 QRSL1Q9H0R6 528 aaKnown RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 CALML5Q9NZT1 146 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 GMPPBQ9Y5P6 360 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 IGHV1OR21-1A0A087WYE8 117 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 B4GAT1O43505 415 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 NUDT21O43809 227 aaKnown RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 ZBTB11O95625 1053 aaPredicted RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 ACP2P11117 423 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 MYF5P13349 255 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 EPHA2P29317 976 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 HLCSP50747 726 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 IL5RAQ01344 420 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 MGAT2Q10469 447 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 PRICKLE4Q2TBC4 344 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 LAIR2Q6ISS4 152 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 RBM44Q6ZP01 1051 aaKnown RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 WDR5BQ86VZ2 330 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 SETD9Q8NE22 299 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 FBLIM1Q8WUP2 373 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 ALPK1Q96QP1 1244 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 ELF4Q99607 663 aaPredicted RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 PSD2Q9BQI7 771 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 PINK1Q9BXM7 581 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 GABARAPL3Q9BY60 117 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 CHRNA10Q9GZZ6 450 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 SPRTNQ9H040 489 aaPredicted RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 ADNPQ9H2P0 1102 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 PAPOLBQ9NRJ5 636 aaKnown RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 MAT2BQ9NZL9 334 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 NDRG4Q9ULP0 352 aaKnown RBP18.71■□□□□ 0.59
RTN1-202ENST00000342503 DSPPQ9NZW4 1301 aa18.71■□□□□ 0.59
RTN1-202ENST00000342503 A0A087WV62 115 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 A8MVJ9 347 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 E9PQ18 207 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 LGI1O95970 557 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 AGR2O95994 175 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 ALPPP05187 535 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 CT62P0C5K7 136 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 TDGF1P13385 188 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 RNH1P13489 461 aaKnown RBP18.7■□□□□ 0.58
RTN1-202ENST00000342503 RPS6KA3P51812 740 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 PDX1P52945 283 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 SKP1P63208 163 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 COLEC12Q5KU26 742 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 ZNF675Q8TD23 568 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 PEX11GQ96HA9 241 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 NIPSNAP1Q9BPW8 284 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 ADAP2Q9NPF8 381 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 HCN4Q9Y3Q4 1203 aa18.7■□□□□ 0.58
RTN1-202ENST00000342503 PLOD3O60568 738 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 SLITRK5O94991 958 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 ZIC2O95409 532 aaPredicted RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 NSA2O95478 260 aaKnown RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 AGXTP21549 392 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 CRHBPP24387 322 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 RPP38P78345 283 aaKnown RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 MAT1AQ00266 395 aaKnown RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 CFHR1Q03591 330 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 FAM53BQ14153 422 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 DUSP5Q16690 384 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 AMZ1Q400G9 498 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 ZNF311Q5JNZ3 666 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 TCTE1Q5JU00 501 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 GARNL3Q5VVW2 1013 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 NIPAL1Q6NVV3 410 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 TAGAPQ8N103 731 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 Q8N9G6 341 aaPredicted RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 TMIGD2Q96BF3 282 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 ZG16BQ96DA0 208 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 NMNAT1Q9HAN9 279 aaPredicted RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 PRMT8Q9NR22 394 aaPredicted RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 POFUT2Q9Y2G5 429 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 USP34Q70CQ2 3546 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 TRBV4-1A0A0J9YWV2 114 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 CASC3O15234 703 aaKnown RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 SLC35E2P0CK97 266 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 GNSP15586 552 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 GLB1P16278 677 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 CBLP22681 906 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 HPCAP84074 193 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 CDK5R2Q13319 367 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 TOP3AQ13472 1001 aaPredicted RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 KCNAB1Q14722 419 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms