RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 A0A0A6YYD5 115 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 RTCAO00442 366 aaKnown RBP9.58□□□□□ -0.88
TPM3-207ENST00000341372 AP3D1O14617 1153 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 DPM1O60762 260 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 B4GALT2O60909 372 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 OR4F21O95013 312 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 ICAM2P13598 275 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 BSGP35613 385 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 SSR2P43308 183 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 HNRNPFP52597 415 aaKnown RBP9.58□□□□□ -0.88
TPM3-207ENST00000341372 PKNOX1P55347 436 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 BTG2P78543 158 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 TEKQ02763 1124 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 ZNF33BQ06732 778 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 IFT88Q13099 833 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 CDK5R2Q13319 367 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 PCLAFQ15004 111 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 AP5B1Q2VPB7 878 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 SFT2D3Q587I9 215 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 GPRIN3Q6ZVF9 776 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 ACAD11Q709F0 780 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 PPP4R1Q8TF05 950 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 AGAP11Q8TF27 550 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 THOC3Q96J01 351 aaKnown RBP9.58□□□□□ -0.88
TPM3-207ENST00000341372 MAPKAP1Q9BPZ7 522 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 SMURF2Q9HAU4 748 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 BRF2Q9HAW0 419 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 SENP1Q9P0U3 644 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 SNX6Q9UNH7 406 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 MRPS33Q9Y291 106 aaKnown RBP9.58□□□□□ -0.88
TPM3-207ENST00000341372 IGHV3-20A0A0C4DH32 117 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 ERAL1O75616 437 aaKnown RBP9.57□□□□□ -0.88
TPM3-207ENST00000341372 ENO1P06733 434 aaKnown RBP9.57□□□□□ -0.88
TPM3-207ENST00000341372 CPA3P15088 417 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 TSPAN8P19075 237 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 MAOAP21397 527 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 ARL1P40616 181 aaPredicted RBP9.57□□□□□ -0.88
TPM3-207ENST00000341372 CASRP41180 1078 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 RAP1GDS1P52306 607 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 RAPSNQ13702 412 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 EXT1Q16394 746 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 CRB2Q5IJ48 1285 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 PAPD4Q6PIY7 484 aaKnown RBP9.57□□□□□ -0.88
TPM3-207ENST00000341372 SRRM1Q8IYB3 904 aaKnown RBP9.57□□□□□ -0.88
TPM3-207ENST00000341372 RBMXL3Q8N7X1 1067 aaKnown RBP9.57□□□□□ -0.88
TPM3-207ENST00000341372 FAM47BQ8NA70 645 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 M1APQ8TC57 530 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 PRPF18Q99633 342 aaKnown RBP9.57□□□□□ -0.88
TPM3-207ENST00000341372 LPAR4Q99677 370 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 C12orf65Q9H3J6 166 aaKnown RBP9.57□□□□□ -0.88
TPM3-207ENST00000341372 ELOVL6Q9H5J4 265 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 RABEP2Q9H5N1 569 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 MMP25Q9NPA2 562 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 PRTFDC1Q9NRG1 225 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 MS4A12Q9NXJ0 267 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 LPAR3Q9UBY5 353 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 ADAM29Q9UKF5 820 aa9.57□□□□□ -0.88
TPM3-207ENST00000341372 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 TMEM120BA0PK00 339 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 SAGE2PA6NJ88 616 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 SAP18O00422 153 aaKnown RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 CLDN4O14493 209 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 TYROBPO43914 113 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 SH3BGRLO75368 114 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 SEC24DO94855 1032 aaPredicted RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 SORBS2O94875 1100 aaKnown RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 ESRRBO95718 433 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 CELA2AP08217 269 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 ATP6V1E1P36543 226 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 OR4D2P58180 307 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 SLC26A5P58743 744 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 MFAP5Q13361 173 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 AGAP7PQ5VUJ5 663 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 IRAK1BP1Q5VVH5 260 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 LIPMQ5VYY2 423 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 H3F3CQ6NXT2 135 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 NUDT13Q86X67 352 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 METTL4Q8N3J2 472 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 TM9SF4Q92544 642 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 RNF125Q96EQ8 232 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 AGAP4Q96P64 663 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 LMF1Q96S06 567 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 TBC1D23Q9NUY8 699 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 LYARQ9NX58 379 aaKnown RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 PHF11Q9UIL8 331 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 PPIEQ9UNP9 301 aaKnown RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 HEMK1Q9Y5R4 338 aaPredicted RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 SPENQ96T58 3664 aaKnown RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 MANBAO00462 879 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 UBFD1O14562 309 aaKnown RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 TMPRSS11DO60235 418 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 CTNSO60931 367 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 EEDO75530 441 aaKnown RBP9.56□□□□□ -0.88
TPM3-207ENST00000341372 ACTL6BO94805 426 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 PDYNP01213 254 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 TK1P04183 234 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 ITGAMP11215 1152 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 NAGLUP54802 743 aa9.56□□□□□ -0.88
TPM3-207ENST00000341372 HNRNPH2P55795 449 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms