RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 AGFG2O95081 481 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 PRPS1L1P21108 318 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 CNR1P21554 472 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 MST1P26927 711 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 KRT20P35900 424 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 MC3RP41968 323 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 PPICP45877 212 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 MANFP55145 182 aaKnown RBP17.69■□□□□ 0.42
SYNE4-202ENST00000340477 CASP6P55212 293 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 KCNJ2P63252 427 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 EMX2Q04743 252 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 HSPB3Q12988 150 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 PDE7AQ13946 482 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 ZNHIT3Q15649 155 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-202ENST00000340477 NNATQ16517 81 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 NTRK2Q16620 822 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 TBCELQ5QJ74 424 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 ANKRD26P1Q6NSI1 321 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 BNC2Q6ZN30 1099 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-202ENST00000340477 RGS9BPQ6ZS82 235 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 SLC22A16Q86VW1 577 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 LRRC34Q8IZ02 419 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 FBXW8Q8N3Y1 598 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 NATD1Q8N6N6 113 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 ZFP62Q8NB50 900 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-202ENST00000340477 OR2M7Q8NG81 312 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 OR7G2Q8NG99 324 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 OR5M3Q8NGP4 307 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 PAQR8Q8TEZ7 354 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 MAGED4Q96JG8 741 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 GPR137Q96N19 417 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 NUF2Q9BZD4 464 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 C20orf27Q9GZN8 174 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 NXF5Q9H1B4 397 aaKnown RBP17.69■□□□□ 0.42
SYNE4-202ENST00000340477 TSPAN10Q9H1Z9 355 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-202ENST00000340477 NPIPA1Q9UND3 350 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 EXO1Q9UQ84 846 aaKnown RBP17.69■□□□□ 0.42
SYNE4-202ENST00000340477 DTX4Q9Y2E6 619 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 EXPH5Q8NEV8 1989 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 ZGRF1Q86YA3 2104 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 FRG2CA6NGY1 282 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 G3V3Y1 287 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 IFI6P09912 130 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 CCL3P10147 92 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 NAGAP17050 411 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 DRD5P21918 477 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 ABCD3P28288 659 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 RFC3P40938 356 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 EMDP50402 254 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 DUSP8Q13202 625 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 PTGR1Q14914 329 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.68■□□□□ 0.42
SYNE4-202ENST00000340477 TTMPQ5BVD1 217 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 CPTPQ5TA50 214 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 LYPD8Q6UX82 237 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 PRR22Q8IZ63 422 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 GHDCQ8N2G8 530 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 OR10G3Q8NGC4 313 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 DIO2Q92813 273 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 SECISBP2Q96T21 854 aaKnown RBP17.68■□□□□ 0.42
SYNE4-202ENST00000340477 SH3GL2Q99962 352 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 AKTIPQ9H8T0 292 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 FOLH1BQ9HBA9 442 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 ACSS1Q9NUB1 689 aaPredicted RBP17.68■□□□□ 0.42
SYNE4-202ENST00000340477 PNPOQ9NVS9 261 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 ASIC5Q9NY37 505 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 ATP6V1HQ9UI12 483 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 BOKQ9UMX3 212 aaPredicted RBP17.68■□□□□ 0.42
SYNE4-202ENST00000340477 OSGIN2Q9Y236 505 aa17.68■□□□□ 0.42
SYNE4-202ENST00000340477 PLOD2O00469 737 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 HDAC3O15379 428 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 SNNO75324 88 aaPredicted RBP17.67■□□□□ 0.42
SYNE4-202ENST00000340477 ERN1O75460 977 aaKnown RBP17.67■□□□□ 0.42
SYNE4-202ENST00000340477 PPM1BO75688 479 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 LBPP18428 481 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 FBXW4P57775 412 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 KCNK10P57789 538 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 PRAMEF20Q5VT98 475 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 PAOXQ6QHF9 649 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 TMEM64Q6YI46 380 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 SZRD1Q7Z422 152 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 SLC34A3Q8N130 599 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 LRRC8CQ8TDW0 803 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 CIDECQ96AQ7 238 aaPredicted RBP17.67■□□□□ 0.42
SYNE4-202ENST00000340477 BTBD9Q96Q07 612 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 DOHHQ9BU89 302 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 MEAF6Q9HAF1 191 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 B4GALT7Q9UBV7 327 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 MARCOQ9UEW3 520 aaPredicted RBP17.67■□□□□ 0.42
SYNE4-202ENST00000340477 C19orf53Q9UNZ5 99 aaPredicted RBP17.67■□□□□ 0.42
SYNE4-202ENST00000340477 OR10H1Q9Y4A9 318 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 FLNCQ14315 2725 aa17.67■□□□□ 0.42
SYNE4-202ENST00000340477 EML6Q6ZMW3 1958 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 KLF11O14901 512 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 ASNA1O43681 348 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 ABCB7O75027 752 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 KITP10721 976 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 G6PDP11413 515 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 IL12BP29460 328 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 DNASE1L1P49184 302 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms