RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 FCRL4Q96PJ5 515 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 FERD3LQ96RJ6 166 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 DPH7Q9BTV6 452 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 SAP130Q9H0E3 1048 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 P2RX2Q9UBL9 471 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 LSM2Q9Y333 95 aaKnown RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 B4DXG7 233 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 AKR7A2O43488 359 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 HYAL3O43820 417 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 HOXB3P14651 431 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 HYAL2Q12891 473 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 LRRC32Q14392 662 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 CDK10Q15131 360 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 FLYWCH1Q4VC44 716 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 LCN1P1Q5VSP4 162 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 DPPA4Q7L190 304 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 YIPF7Q8N8F6 280 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 UFD1Q92890 307 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 SLC25A46Q96AG3 418 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 KATNB1Q9BVA0 655 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 RNF121Q9H920 327 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 NDUFB11Q9NX14 153 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 PLEKHB1Q9UF11 243 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 MRPS7Q9Y2R9 242 aaKnown RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 GPSM3Q9Y4H4 160 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 HELZP42694 1942 aaKnown RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 ZC3H12DA2A288 527 aaKnown RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 E9PQ18 207 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SLC2A10O95528 541 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SLC9A3P48764 834 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 WNT4P56705 351 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 CLDN2P57739 230 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 MLLT11Q13015 90 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 TATDN3Q17R31 274 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 Q5BKY6 102 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 IDNKQ5T6J7 187 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 PIP5KL1Q5T9C9 394 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 NDUFAF5Q5TEU4 345 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SAXO2Q658L1 398 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 PRICKLE2Q7Z3G6 844 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 GRASPQ7Z6J2 395 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 AMZ2Q86W34 360 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 VRK2Q86Y07 508 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SLC7A6Q92536 515 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 DTD2Q96FN9 168 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SGPP1Q9BX95 441 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 H2AFY2Q9P0M6 372 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 PTGFRNQ9P2B2 879 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 A4GNTQ9UNA3 340 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 HMGN2P05204 90 aaKnown RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SRPRAP08240 638 aaKnown RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 VIPR2P41587 438 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 PXNP49023 591 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SNRPGP62308 76 aaKnown RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 WSCD2Q2TBF2 565 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 KLHL12Q53G59 568 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 LYPD8Q6UX82 237 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 HSDL2Q6YN16 418 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 DGLUCYQ7Z3D6 616 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 C12orf40Q86WS4 652 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 TP53I13Q8NBR0 393 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 METTL2AQ96IZ6 378 aaKnown RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 KLHL31Q9H511 634 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 TRIM45Q9H8W5 580 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 GRIP1Q9Y3R0 1128 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SCN2AQ99250 2005 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 HMX3A6NHT5 357 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 PGRMC2O15173 223 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 RHOP08100 348 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 GNSP15586 552 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 MTNR1AP48039 350 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SLC6A11P48066 632 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 CDH11P55287 796 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 RPS7P62081 194 aaKnown RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 MEDAGQ5VYS4 303 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 KLBQ86Z14 1044 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 SMAP2Q8WU79 429 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-201ENST00000340437 NXPE3Q969Y0 559 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 RELTQ969Z4 430 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 RNF31Q96EP0 1072 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 MRGPRX3Q96LB0 322 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 GLIPR2Q9H4G4 154 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 KLHL1Q9NR64 748 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 OR1A2Q9Y585 309 aa13.58□□□□□ -0.24
CPSF7-201ENST00000340437 ERI3O43414 337 aaKnown RBP13.57□□□□□ -0.24
CPSF7-201ENST00000340437 LALBAP00709 142 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 ACP5P13686 325 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 LAG3P18627 525 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 ETV6P41212 452 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 HTR2BP41595 481 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 CCDC149Q6ZUS6 474 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 KRT74Q7RTS7 529 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 NUDT13Q86X67 352 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 VWA5B2Q8N398 1253 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 ANKK1Q8NFD2 765 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 BBS1Q8NFJ9 593 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 ARRDC3Q96B67 414 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 LGR4Q9BXB1 951 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms