RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 FBXO45P0C2W1 286 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 DDX5P17844 614 aaKnown RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 GPC1P35052 558 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 MANFP55145 182 aaKnown RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 NRG3P56975 720 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 GPR85P60893 370 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 SLC9B1Q4ZJI4 515 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 CPTPQ5TA50 214 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 OGFOD2Q6N063 350 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 RTL4Q6ZR62 310 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 SULF2Q8IWU5 870 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 PRR22Q8IZ63 422 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 CPSF7Q8N684 471 aaKnown RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 GOLM1Q8NBJ4 401 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 FAM98AQ8NCA5 519 aaKnown RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 FAM13CQ8NE31 585 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 ZFP28Q8NHY6 868 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 CKAP2Q8WWK9 683 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 LCORQ96JN0 433 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 SGCZQ96LD1 299 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 MAGEB18Q96M61 343 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 ACSS1Q9NUB1 689 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 OLAHQ9NV23 265 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 TAS2R9Q9NYW1 312 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 VPS4AQ9UN37 437 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 GTF3C1Q12789 2109 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 ASPDHA6ND91 283 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 KLRC4-KLRK1H3BQV0 150 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 UPK1AO00322 258 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 PEX1O43933 1283 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 WISP1O95388 367 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 CRYABP02511 175 aaKnown RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 DRD5P21918 477 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 ABCD3P28288 659 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 PPICP45877 212 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 CDK9P50750 372 aaKnown RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 C21orf58P58505 322 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 ZNF324BQ6AW86 544 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 ATCAYQ86WG3 371 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 DND1Q8IYX4 353 aaKnown RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 OR2L13Q8N349 312 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 GALNT11Q8NCW6 608 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 OR10G3Q8NGC4 313 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 OR5M3Q8NGP4 307 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 DNAJB8Q8NHS0 232 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 COQ8BQ96D53 544 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 MAELQ96JY0 434 aaKnown RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 VSTM2LQ96N03 204 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 FRMD6Q96NE9 622 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 PRPF18Q99633 342 aaKnown RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 DPY30Q9C005 99 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 FOLH1BQ9HBA9 442 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 DEPPQ9NTK1 212 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 RYDENQ9NUL5 291 aaKnown RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 ATAD3AQ9NVI7 634 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 DDX18Q9NVP1 670 aaKnown RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 C19orf53Q9UNZ5 99 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 GPR55Q9Y2T6 319 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-201ENST00000340074 NPFFR2Q9Y5X5 522 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 USH1CQ9Y6N9 552 aa14.06□□□□□ -0.16
UBE3B-201ENST00000340074 CAPN14A8MX76 684 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 G3V3Y1 287 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 ANKRD28O15084 1053 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 COQ9O75208 318 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 ERN1O75460 977 aaKnown RBP14.05□□□□□ -0.16
UBE3B-201ENST00000340074 CT45A8P0DMV1 189 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 CT45A9P0DMV2 189 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 CCL3P10147 92 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 MST1P26927 711 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 UQCRFS1P47985 274 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 MEOX1P50221 254 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 CORO7P57737 925 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 FBXW4P57775 412 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 DCAF7P61962 342 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 MLC1Q15049 377 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 NTRK2Q16620 822 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 HSP90B2PQ58FF3 399 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 CT45A2Q5DJT8 189 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 NXNQ6DKJ4 435 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 FAM47EQ6ZV65 393 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 SPATA19Q7Z5L4 167 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 NR4A3Q92570 626 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 HSPBAP1Q96EW2 488 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 BTBD9Q96Q07 612 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 SLX1AQ9BQ83 275 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 SH2D2AQ9NP31 389 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 SACM1LQ9NTJ5 587 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 MAPRE3Q9UPY8 281 aa14.05□□□□□ -0.16
UBE3B-201ENST00000340074 MYO18BQ8IUG5 2567 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 A0A0G2JMM0 328 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 A0A1W2PPB8 328 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 A0A1W2PRB8 838 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 A0A1W2PRS3 328 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 FRG2CA6NGY1 282 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 KIR3DP1A8MWS1 328 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 ACOX3O15254 700 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 DIAPH2O60879 1101 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 PSMG1O95456 288 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 CBX6O95503 412 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 P04436 131 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms