RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 IL27RAQ6UWB1 636 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM72BQ86X60 149 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 SIAH3Q8IW03 269 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 SVBPQ8N300 66 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 MEIOBQ8N635 442 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 NPWQ8N729 165 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 GPR26Q8NDV2 337 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 CENPIQ92674 756 aaPredicted RBP9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 PAWRQ96IZ0 340 aaKnown RBP9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 PPP3R2Q96LZ3 170 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 POLDIP3Q9BY77 421 aaKnown RBP9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 COA1Q9GZY4 146 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 OR10A4Q9H209 315 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 LHX9Q9NQ69 397 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 LANCL2Q9NS86 450 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 TEX10Q9NXF1 929 aaPredicted RBP9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 VSX1Q9NZR4 365 aaPredicted RBP9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 FZD4Q9ULV1 537 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 RAI2Q9Y5P3 530 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 SNX10Q9Y5X0 201 aa9.15□□□□□ -0.94
PTCHD4-201ENST00000339488 PRAMEF2O60811 474 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 YIF1AO95070 293 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 EIF4EP06730 217 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 UGT2B7P16662 529 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 PSMA3P25788 255 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 SHC1P29353 583 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 CNR2P34972 360 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 MATKP42679 507 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 LCP2Q13094 533 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 DUOXA2Q1HG44 320 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 SOWAHAQ2M3V2 549 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 GOLGA7BQ2TAP0 167 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 C18orf21Q32NC0 220 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 SGO1Q5FBB7 561 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 XKR7Q5GH72 579 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 IDNKQ5T6J7 187 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 DHRS7BQ6IAN0 325 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC30A6Q6NXT4 461 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC27A1Q6PCB7 646 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 MBOAT1Q6ZNC8 495 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 CFAP206Q8IYR0 622 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 C2CD4AQ8NCU7 369 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM46DQ8NEK8 389 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 OR10G2Q8NGC3 310 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TMEM163Q8TC26 289 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 RNF139Q8WU17 664 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 ING5Q8WYH8 240 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 C3orf49Q96BT1 292 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 C14orf79Q96F83 325 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 YIPF4Q9BSR8 244 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TMED9Q9BVK6 235 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 GAREM1Q9H706 876 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TBC1D17Q9HA65 648 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 ASF1BQ9NVP2 202 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 MMACHCQ9Y4U1 282 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 CASC3O15234 703 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 FARS2O95363 451 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC34A2O95436 690 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 PMP2P02689 132 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 HLA-DOAP06340 250 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 LCP1P13796 627 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TMEM11P17152 192 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC11A2P49281 568 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 CDH12P55289 794 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 RAB2AP61019 212 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 DOK6Q6PKX4 331 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TRPV1Q8NER1 839 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 C9orf43Q8TAL5 461 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 HAVCR2Q8TDQ0 301 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 DCAF4Q8WV16 495 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TCEAL4Q96EI5 215 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 C12orf42Q96LP6 360 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 OR1F2PQ96R84 312 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 ABHD1Q96SE0 405 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 DUSP26Q9BV47 211 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 NT5C1AQ9BXI3 368 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 NSUN3Q9H649 340 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 C11orf49Q9H6J7 331 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 MARCH4Q9P2E8 410 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF69Q9UC07 566 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 CD8B2A6NJW9 211 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 SMAD9O15198 467 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 HCRTO43612 131 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TXNDC12O95881 172 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 PFKMP08237 780 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 CD8BP10966 210 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 CD1DP15813 335 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF14P17017 642 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 RBP2P50120 134 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 OR2B8PP59922 312 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 OR8G1Q15617 311 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 FBXO46Q6PJ61 603 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 ESPNLQ6ZVH7 1005 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TMEM17Q86X19 198 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 NLGN1Q8N2Q7 840 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 CELF5Q8N6W0 485 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 OR1S2Q8NGQ3 325 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 AP3S1Q92572 193 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms