RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 RAB39AQ14964 217 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 ELOCQ15369 112 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 AMZ1Q400G9 498 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 FGD3Q5JSP0 725 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SNAP47Q5SQN1 464 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 ARMC6Q6NXE6 501 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 ABHD13Q7L211 337 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 CLIP4Q8N3C7 705 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 AQP11Q8NBQ7 271 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC7A13Q8TCU3 470 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 PIK3R3Q92569 461 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 RDH12Q96NR8 316 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 FAM32AQ9Y421 112 aaKnown RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 FOXS1O43638 330 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 WBP4O75554 376 aaKnown RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 DNAJB5O75953 348 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 BMP10O95393 424 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SOX14O95416 240 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 ZBTB11O95625 1053 aaPredicted RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 IFNA14P01570 189 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 PROS1P07225 676 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 RHCEP18577 417 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 GSTM5P46439 218 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 FASLGP48023 281 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 CXCL12P48061 93 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 IDH2P48735 452 aaKnown RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 FOXL2P58012 376 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 NXPH1P58417 271 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 NPTX1Q15818 432 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 DUSP5Q16690 384 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 CCDC103Q8IW40 242 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 ENTHD1Q8IYW4 607 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SPARTQ8N0X7 666 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 CA13Q8N1Q1 262 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 NATD1Q8N6N6 113 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 Q8N9G6 341 aaPredicted RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 C19orf47Q8N9M1 422 aaKnown RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 CADM4Q8NFZ8 388 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 PHF10Q8WUB8 498 aaKnown RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 APH1BQ8WW43 257 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 PROX1Q92786 737 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 ANKRD9Q96BM1 317 aaPredicted RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 PEX11GQ96HA9 241 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF354BQ96LW1 612 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 NELL2Q99435 816 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 GPA33Q99795 319 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SPRTNQ9H040 489 aaPredicted RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 FANCEQ9HB96 536 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SEMA3GQ9NS98 782 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 LYARQ9NX58 379 aaKnown RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 PSME2Q9UL46 239 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 A4GNTQ9UNA3 340 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 KLK4Q9Y5K2 254 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 MAU2Q9Y6X3 613 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SMIM31A0A1B0GVY4 71 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 A8MU76 341 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ZSCAN9O15535 394 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 CHST10O43529 356 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 FOXD2O60548 495 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 BCAS1O75363 584 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ANGPTL1O95841 491 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ITGAMP11215 1152 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 PORP16435 677 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 POU1F1P28069 291 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 MAP2K4P45985 399 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 CAPZBP47756 277 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 RFX3P48380 749 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 HMGA2P52926 109 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 NUDT6P53370 316 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 CRISP3P54108 245 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 TUBA4AP68366 448 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 PRR5P85299 388 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 DBPQ10586 325 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ZC3H12BQ5HYM0 836 aaKnown RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 GPR107Q5VW38 600 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF770Q6IQ21 691 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 MFSD12Q6NUT3 480 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 TMEM64Q6YI46 380 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 CLVS1Q8IUQ0 354 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 TMEM151BQ8IW70 566 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ADAMTS16Q8TE57 1224 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 CLDN23Q96B33 292 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 NRBF2Q96F24 287 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 SHDQ96IW2 340 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF347Q96SE7 839 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 CCDC90BQ9GZT6 254 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 LHPPQ9H008 270 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 GIMAP4Q9NUV9 329 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 DNAAF2Q9NVR5 837 aaKnown RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ERVK-18Q9QC07 812 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 RNF6Q9Y252 685 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 RNF215Q9Y6U7 377 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 LMO7DNF2Z398 122 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 BCAT2O15382 392 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 HYAL3O43820 417 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 DPM1O60762 260 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 GIMD1P0DJR0 217 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 NT5EP21589 574 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ELAVL4P26378 380 aaKnown RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 TLX1P31314 330 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms