RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SNX11Q9Y5W9 270 aa17.74■□□□□ 0.43
PSPC1-201ENST00000338910 DENND4AQ7Z401 1863 aa17.74■□□□□ 0.43
PSPC1-201ENST00000338910 PIPSLA2A3N6 862 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 ARRDC5A6NEK1 342 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 K7EQS6 105 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 TNFRSF21O75509 655 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 FAM157BP0CG42 384 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 IFI30P13284 250 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 ETFAP13804 333 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 POU1F1P28069 291 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 CRATP43155 626 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 ENPP2Q13822 863 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 TMEM201Q5SNT2 666 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 CCNJQ5T5M9 372 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 IER5LQ5T953 404 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 DUSP18Q8NEJ0 188 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 ATP6V1C2Q8NEY4 427 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 PROKR2Q8NFJ6 384 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 SLC5A11Q8WWX8 675 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 MARVELD3Q96A59 401 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 RSPH9Q9H1X1 276 aaPredicted RBP17.73■□□□□ 0.43
PSPC1-201ENST00000338910 RBFOX1Q9NWB1 397 aaKnown RBP17.73■□□□□ 0.43
PSPC1-201ENST00000338910 ING3Q9NXR8 418 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 DNAJC27Q9NZQ0 273 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 TEKT2Q9UIF3 430 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 HSPB11Q9Y547 144 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 GADD45GO95257 159 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 DGKEP52429 567 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 CASP9P55211 416 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 SPIN4Q56A73 249 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 C2orf27AQ580R0 203 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 ZNF770Q6IQ21 691 aaPredicted RBP17.73■□□□□ 0.43
PSPC1-201ENST00000338910 AMIGO1Q86WK6 493 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 LSMEM1Q8N8F7 131 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 VPS37AQ8NEZ2 397 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 OR9Q1Q8NGQ5 310 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 SLC6A18Q96N87 628 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 NMNAT1Q9HAN9 279 aaPredicted RBP17.73■□□□□ 0.43
PSPC1-201ENST00000338910 C11orf16Q9NQ32 467 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 B3GNT2Q9NY97 397 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 MAT2BQ9NZL9 334 aa17.73■□□□□ 0.43
PSPC1-201ENST00000338910 TLR4O00206 839 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 HCN1O60741 890 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 PSKH1P11801 424 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 MAN2A2P49641 1150 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 GANABQ14697 944 aaKnown RBP17.72■□□□□ 0.43
PSPC1-201ENST00000338910 ZNF628Q5EBL2 1059 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 RNLSQ5VYX0 342 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 HIST2H2AA3Q6FI13 130 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 PAQR6Q6TCH4 344 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 NXPE4Q6UWF7 544 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 ZNF852Q6ZMS4 543 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 CAMKMTQ7Z624 323 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 PDZD3Q86UT5 571 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 LRRTM4Q86VH4 590 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 GEMIN6Q8WXD5 167 aaKnown RBP17.72■□□□□ 0.43
PSPC1-201ENST00000338910 RAD51AP1Q96B01 352 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 EFCAB11Q9BUY7 163 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 ZNF282Q9UDV7 671 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-201ENST00000338910 NDOR1Q9UHB4 597 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 NUMA1Q14980 2115 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 TRIOO75962 3097 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 PRAMEF33A0A0G2JMD5 474 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 PRAMEF10O60809 474 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 LTBRP36941 435 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 KIR2DL1P43626 348 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-201ENST00000338910 SLC9A3P48764 834 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 MADCAM1Q13477 382 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 SCARB2Q14108 478 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 TOR2AQ5JU69 321 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 ZBED6CLQ96FA7 236 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-201ENST00000338910 METTL2AQ96IZ6 378 aaKnown RBP17.72■□□□□ 0.43
PSPC1-201ENST00000338910 SLC23A1Q9UHI7 598 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 TMCC3Q9ULS5 477 aa17.72■□□□□ 0.43
PSPC1-201ENST00000338910 SMLR1H3BR10 107 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 IDSP22304 550 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 TIA1P31483 386 aaKnown RBP eCLIP17.71■□□□□ 0.433e-6■■■■□ 19.7
PSPC1-201ENST00000338910 ASMTP46597 345 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 RRAS2P62070 204 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-201ENST00000338910 ZNF91Q05481 1191 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 ANXA8L1Q5VT79 327 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 C22orf42Q6IC83 251 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 KIAA1211LQ6NV74 962 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 ANGPTL8Q6UXH0 198 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 UNC5DQ6UXZ4 953 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 NFKBIDQ8NI38 313 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 GANCQ8TET4 914 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 WDR34Q96EX3 536 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 ANKRA2Q9H9E1 313 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 MCUBQ9NWR8 336 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 ENPP4Q9Y6X5 453 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 CDK2AP1O14519 115 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 PI15O43692 258 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 POLR2CP19387 275 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-201ENST00000338910 APEX1P27695 318 aaKnown RBP17.71■□□□□ 0.43
PSPC1-201ENST00000338910 FEN1P39748 380 aaKnown RBP17.71■□□□□ 0.43
PSPC1-201ENST00000338910 CLDN20P56880 219 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 C1DQ13901 141 aaKnown RBP17.71■□□□□ 0.43
PSPC1-201ENST00000338910 LEXMQ3ZCV2 418 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 PRAMEF14Q5SWL7 426 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms