RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CXorf36Q9H7Y0 433 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 FBRSQ9HAH7 460 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 PRSS16Q9NQE7 514 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 NDUFB11Q9NX14 153 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 MS4A12Q9NXJ0 267 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 GPR83Q9NYM4 423 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 AASSQ9UDR5 926 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.18□□□□□ -0.78
RTN3-201ENST00000338850 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.18□□□□□ -0.78
RTN3-201ENST00000338850 PCDHGA4Q9Y5G9 962 aa10.18□□□□□ -0.78
RTN3-201ENST00000338850 KRT87PA6NCN2 255 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 C5orf58C9J3I9 102 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 TLR4O00206 839 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 SYT5O00445 386 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 PLPP1O14494 284 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 PCDH17O14917 1159 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 SEC14L5O43304 696 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 SH3BP5O60239 455 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 KCNJ13O60928 360 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 COQ9O75208 318 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 CLEC3AO75596 197 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 UGT2B17O75795 530 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 APOA1P02647 267 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 OPN1SWP03999 348 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 H1F0P07305 194 aaKnown RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 GSTM3P21266 225 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 AQP1P29972 269 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 ACSL1P33121 698 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 GRK5P34947 590 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 TSFMP43897 325 aaKnown RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 GPR1P46091 355 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 BNC1Q01954 994 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 SEC23BQ15437 767 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 LRRC73Q5JTD7 316 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 DCST1Q5T197 706 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 STEAP3Q658P3 488 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 CEACAM20Q6UY09 585 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 PTCHD4Q6ZW05 846 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 ZBTB46Q86UZ6 589 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 C17orf64Q86WR6 236 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 ZNF547Q8IVP9 402 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 CFAP206Q8IYR0 622 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 PARP16Q8N5Y8 322 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 LILRA3Q8N6C8 439 aaPredicted RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 KDF1Q8NAX2 398 aaPredicted RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 OR9Q2Q8NGE9 314 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 OR9Q1Q8NGQ5 310 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 CXorf40AQ8TE69 158 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 UTP15Q8TED0 518 aaKnown RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 SMPDL3AQ92484 453 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 CIDECQ96AQ7 238 aaPredicted RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 TM4SF18Q96CE8 201 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 TMEM80Q96HE8 168 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 CAMK1GQ96NX5 476 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 OPALINQ96PE5 141 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 CTRCQ99895 268 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 MED18Q9BUE0 208 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 SARGQ9BW04 601 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 RAB11FIP5Q9BXF6 653 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 HDAC8Q9BY41 377 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 OR51B5Q9H339 312 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 C6orf106Q9H6K1 298 aaPredicted RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 DDX31Q9H8H2 851 aaKnown RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 SIRT3Q9NTG7 399 aaPredicted RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 P2RX2Q9UBL9 471 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 FAM8A1Q9UBU6 413 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 ZNF229Q9UJW7 825 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 DIMT1Q9UNQ2 313 aaKnown RBP10.17□□□□□ -0.78
RTN3-201ENST00000338850 SH2B3Q9UQQ2 575 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 PCDHGB6Q9Y5F9 930 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 SLCO1B1Q9Y6L6 691 aa10.17□□□□□ -0.78
RTN3-201ENST00000338850 HYKKA2RU49 373 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 SNTNA6NMZ2 147 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 ZNF670-ZNF695F2Z2N8 137 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 FFAR1O14842 300 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 BCAT2O15382 392 aaPredicted RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 DYRK3O43781 588 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 KIAA0513O60268 411 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 POP7O75817 140 aaKnown RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 TBX6O95947 436 aaPredicted RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 TGFB1P01137 390 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 IL1AP01583 271 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 KLK1P06870 262 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 C6P13671 934 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 ADRB3P13945 408 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 PTBP1P26599 531 aaKnown RBP eCLIP10.16□□□□□ -0.782e-11■■■□□ 17.6
RTN3-201ENST00000338850 SOAT1P35610 550 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 CCR8P51685 355 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 MAPK12P53778 367 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 C1DQ13901 141 aaKnown RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 SSX1Q16384 188 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 TMEM35AQ53FP2 167 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 C3orf38Q5JPI3 329 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 ENTPD8Q5MY95 495 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 ZNF648Q5T619 568 aaPredicted RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 ZNF776Q68DI1 518 aaPredicted RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 TCTN3Q6NUS6 607 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 PGBD2Q6P3X8 592 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 BHLHB9Q6PI77 547 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms