RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 MAFKO60675 156 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 IFNA5P01569 189 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 MTFR2Q6P444 385 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 CPXM2Q8N436 756 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 SPERTQ8NA61 448 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 SH3YL1Q96HL8 342 aaPredicted RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 KLHL15Q96M94 604 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 SPIN2AQ99865 258 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 SPIN2BQ9BPZ2 258 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 NXT1Q9UKK6 140 aaKnown RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 SLC6A5Q9Y345 797 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 CD46P15529 392 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 AMY2BP19961 511 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 OTX2P32243 289 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 SGCAQ16586 387 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 LRIT3Q3SXY7 679 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 TECRLQ5HYJ1 363 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 SPANXN4Q5MJ08 99 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 TMEM135Q86UB9 458 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 OSTM1Q86WC4 334 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 MISPQ8IVT2 679 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 ZNF611Q8N823 705 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 HUS1BQ8NHY5 278 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 SRA1Q9HD15 236 aaKnown RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 ERVK-18Q9QC07 812 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 DOCK9Q9BZ29 2069 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 ERVK-16P61578 105 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 RAB11BQ15907 218 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 C6orf136Q5SQH8 315 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 TLDC1Q6P9B6 456 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 MINDY1Q8N5J2 469 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 DIO2Q92813 273 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 LMF2Q9BU23 707 aaKnown RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 ZNF350Q9GZX5 532 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 SCAMP2O15127 329 aaKnown RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 SCGB1D2O95969 90 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 FKBP2P26885 142 aaKnown RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 MORN1Q5T089 497 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 ACBD7Q8N6N7 88 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 OR8J1Q8NGP2 316 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 HCAR1Q9BXC0 346 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 OR51I1Q9H343 314 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 FAM227AF5H4B4 570 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 CST5P28325 142 aaPredicted RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 ZNF181Q2M3W8 571 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 UTS2BQ765I0 119 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 GMLQ99445 158 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 ATG5Q9H1Y0 275 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 WRAP73Q9P2S5 460 aaPredicted RBP11.69□□□□□ -0.54
FN1-202ENST00000336916 ABCG2Q9UNQ0 655 aa11.69□□□□□ -0.54
FN1-202ENST00000336916 MT-ND1P03886 318 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 EDN1P05305 212 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 STK19P49842 368 aaPredicted RBP11.68□□□□□ -0.54
FN1-202ENST00000336916 GPR176Q14439 515 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 LDLRAD1Q5T700 205 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 SMG8Q8ND04 991 aaKnown RBP11.68□□□□□ -0.54
FN1-202ENST00000336916 GPR150Q8NGU9 434 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 OR6N2Q8NGY6 317 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ZFYVE21Q9BQ24 234 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 SPTA1P02549 2419 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ZDBF2Q9HCK1 2354 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 TRBV2A0A0J9YWF9 115 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 A6NLC8 198 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 AXIN1O15169 862 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 EFNA1P20827 205 aaPredicted RBP11.68□□□□□ -0.54
FN1-202ENST00000336916 ETV6P41212 452 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ESCO2Q56NI9 601 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 BEND4Q6ZU67 534 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 FNDC8Q8TC99 324 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 XYLT2Q9H1B5 865 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 RNF6Q9Y252 685 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 RASAL1O95294 804 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ZNF806P0C7X5 589 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 TM4SF4P48230 202 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 IST1P53990 364 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 RAB8AP61006 207 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 GRK1Q15835 563 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 DEFB134Q4QY38 66 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 CDRT4Q8N9R6 151 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 BORCS7Q96B45 105 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 MRGPRX2Q96LB1 330 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ZNF700Q9H0M5 742 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 VNN3Q9NY84 501 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 SIX4Q9UIU6 781 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 HIF3AQ9Y2N7 669 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ABCA1O95477 2261 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 DOCK8Q8NF50 2099 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 C2orf92A0A1B0GVN3 265 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 FOXD2O60548 495 aaPredicted RBP11.68□□□□□ -0.54
FN1-202ENST00000336916 LBX1P52954 281 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 DCAF12L1Q5VU92 463 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ABCA3Q99758 1704 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 CNOT1A5YKK6 2376 aaKnown RBP11.68□□□□□ -0.54
FN1-202ENST00000336916 ATE1O95260 518 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 FOXN2P32314 431 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 DCAF12Q5T6F0 453 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 YOD1Q5VVQ6 348 aaPredicted RBP11.68□□□□□ -0.54
FN1-202ENST00000336916 LCTLQ6UWM7 567 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms