RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CBY1Q9Y3M2 126 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ADAM18Q9Y3Q7 739 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SHOXO15266 292 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CD1DP15813 335 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CLCNKAP51800 687 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 RIDAP52758 137 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 FKBP1AP62942 108 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 PAN3Q58A45 887 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CARD17Q5XLA6 110 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 TIGD3Q6B0B8 471 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CLEC20AQ6ZU45 233 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 TMEM173Q86WV6 379 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SPARTQ8N0X7 666 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CLDN19Q8N6F1 224 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SIMC1Q8NDZ2 872 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 MOAP1Q96BY2 351 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 TSGA13Q96PP4 275 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 MEPEQ9NQ76 525 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SLC6A5Q9Y345 797 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 MED6O75586 246 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 NDUFV2P19404 249 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SLC2A5P22732 501 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF41P51814 821 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 RPS24P62847 133 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 NOGQ13253 232 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ALKAL2Q6UX46 152 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SLC5A8Q8N695 610 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 OR5P2Q8WZ92 322 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 TSPAN10Q9H1Z9 355 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 POPDC3Q9HBV1 291 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 HEMK1Q9Y5R4 338 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 FER1L4A9Z1Z3 1794 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 A0A1W2PQ09 198 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 UPK3BL1B0FP48 263 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 UPK3BL2E5RIL1 263 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 PRSS3P35030 304 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SLAMF1Q13291 335 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SGCAQ16586 387 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 GPR142Q7Z601 462 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 GALNT10Q86SR1 603 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CCDC116Q8IYX3 515 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 MS4A15Q8N5U1 240 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 DNAJC5GQ8N7S2 189 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 OR52E2Q8NGJ4 325 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 CPT1CQ8TCG5 803 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 PGAM5Q96HS1 289 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ASB6Q9NWX5 421 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 POU2F3Q9UKI9 436 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ATRNO75882 1429 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 RIC1Q4ADV7 1423 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 AQP9O43315 295 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 RAB3DO95716 219 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ALDOAP04075 364 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 AKAIN1P0CW23 69 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 LIPCP11150 499 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 GIFP27352 417 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 MSX1P28360 303 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 POLR2HP52434 150 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 VSX2P58304 361 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 FXYD4P59646 89 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 PAFAH1B3Q15102 231 aaKnown RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 IDO2Q6ZQW0 420 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 OR5AK2Q8NH90 309 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 FBXO27Q8NI29 283 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 ELP4Q96EB1 424 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 SLC29A1Q99808 456 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 NLE1Q9NVX2 485 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-201ENST00000334504 COQ4Q9Y3A0 265 aa9.36□□□□□ -0.91
COL4A6-201ENST00000334504 TBX18O95935 607 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 OAS1P00973 400 aaKnown RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 CSF1P09603 554 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ENDOUP21128 410 aaKnown RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 NDUFA6P56556 154 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 RBM39Q14498 530 aaKnown RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF169Q14929 603 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 TATDN3Q17R31 274 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 CLVS2Q5SYC1 327 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 GAB3Q8WWW8 586 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 SMPDL3AQ92484 453 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ACTL8Q9H568 366 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 ZFP57Q9NU63 452 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 PCDHGA2Q9Y5H1 932 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 A0A1W2PS29 197 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 HHLA1C9JL84 531 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 TOR1AO14656 332 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 B4GAT1O43505 415 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 TPPPO94811 219 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 HRGP04196 525 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 HTRA4P83105 476 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 MS4A2Q01362 244 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 SLC10A6Q3KNW5 377 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 MICU1Q9BPX6 476 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 CARS2Q9HA77 564 aaKnown RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 RDH14Q9HBH5 336 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 SLAMF7Q9NQ25 335 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 AK6Q9Y3D8 172 aaKnown RBP9.35□□□□□ -0.91
COL4A6-201ENST00000334504 HSD17B1P14061 328 aa9.35□□□□□ -0.91
COL4A6-201ENST00000334504 RPL10P27635 214 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms