RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 AQP9O43315 295 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 DCNP07585 359 aaKnown RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 GNRHRP30968 328 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CORO1AP31146 461 aaKnown RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 LY6KQ17RY6 165 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 AMZ2Q86W34 360 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SMOC2Q9H3U7 446 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CACFD1Q9UGQ2 172 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 NOX1Q9Y5S8 564 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ATRNL1Q5VV63 1379 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 TRBV2A0A0J9YWF9 115 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ICMTO60725 284 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 GP1BBP13224 206 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ATP1B2P14415 290 aaPredicted RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 PCGF2P35227 344 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 HBG1P69891 147 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 HBG2P69892 147 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CD276Q5ZPR3 534 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 SLC2A7Q6PXP3 512 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 C1orf74Q96LT6 269 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 TBX5Q99593 518 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 FN3KRPQ9HA64 309 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 KCNS2Q9ULS6 477 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 CLCA3PQ9Y6N3 262 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 A6NIZ1 184 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 YKT6O15498 198 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 UBL3O95164 117 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SLC1A3P43003 542 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 NUDT6P53370 316 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 RAP1BP61224 184 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 UFM1P61960 85 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 RAP1AP62834 184 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 BTG3Q14201 252 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ITPRIPL2Q3MIP1 535 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SLC51BQ86UW2 128 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 FRZBQ92765 325 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 BCO2Q9BYV7 579 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 HIPK2Q9H2X6 1198 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 WDR6Q9NNW5 1121 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ADARB2Q9NS39 739 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF226Q9NYT6 803 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 DKKL1Q9UK85 242 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MYH2Q9UKX2 1941 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 UBE2Q2LH0YL09 131 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GRIN3BO60391 1043 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 TOXO94900 526 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 RD3Q7Z3Z2 195 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF695Q8IW36 515 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 OR5W2Q8NH69 310 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 PWWP2AQ96N64 755 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LRFN5Q96NI6 719 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SOX17Q9H6I2 414 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LDAHQ9H6V9 325 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ETV3P41162 512 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 HTR3AP46098 478 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 BMXP51813 675 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MAXP61244 160 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SLC7A9P82251 487 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MANEALQ5VSG8 457 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 NCBP2-AS2Q69YL0 99 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GPC2Q8N158 579 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 DBF4BQ8NFT6 615 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF75AQ96N20 296 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 DHRS9Q9BPW9 319 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MYH7BA7E2Y1 1941 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 CHD4Q14839 1912 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 C2orf78A6NCI8 922 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LRIT2A6NDA9 550 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MAKP20794 623 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 CHAF1BQ13112 559 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MLC1Q15049 377 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 OR10G6Q8NH81 332 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 OR1E3Q8WZA6 343 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MED18Q9BUE0 208 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MAFBQ9Y5Q3 323 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 SLC22A7Q9Y694 548 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 HAS3O00219 553 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 MEN1O00255 615 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 RNASET2O00584 256 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 RPP14O95059 124 aaKnown RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 PNMTP11086 282 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 CTNNB1P35222 781 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 PTH2RP49190 550 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 DSC2Q02487 901 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 BTN1A1Q13410 526 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GBX1Q14549 363 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 LRRC37A5PQ49AS3 106 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GPR157Q5UAW9 335 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 OTUD1Q5VV17 481 aaPredicted RBP5.27□□□□□ -1.57
PTPRB-202ENST00000334414 Q6ZNX1 250 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 OR4M1Q8NGD0 313 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 OR5H6Q8NGV6 325 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GIMAP1Q8WWP7 306 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 DDIT4LQ96D03 193 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 CLIP3Q96DZ5 547 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 GPR83Q9NYM4 423 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 ARFGEF2Q9Y6D5 1785 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 NPIPA5A0A0B4J1W7 369 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 TCRBV7S2A1N4TA0A589 114 aa5.27□□□□□ -1.57
PTPRB-202ENST00000334414 EMC8O43402 210 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms