RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SNX11Q9Y5W9 270 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 A0A1W2PRB8 838 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 KHDRBS3O75525 346 aaKnown RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 OR2B3O76000 313 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 CDK6Q00534 326 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 SELPLGQ14242 412 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 GPR18Q14330 331 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 PCBP2Q15366 365 aaKnown RBP eCLIP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 ASPGQ86U10 573 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 MAL2Q969L2 176 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 YIPF4Q9BSR8 244 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 TMED9Q9BVK6 235 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 GPR45Q9Y5Y3 372 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 CCDC163A0A0D9SF12 145 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 FEZF1A0PJY2 475 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 DNAJB5O75953 348 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 KLK1P06870 262 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 FGF4P08620 206 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 PTNP21246 168 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 SLC19A1P41440 591 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 GRK6P43250 576 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF181Q2M3W8 571 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 HLA-BQ31612 363 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 C14orf28Q4W4Y0 310 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 PEX5LQ8IYB4 626 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ARL14Q8N4G2 192 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 SLC37A3Q8NCC5 494 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 DNAJB8Q8NHS0 232 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 CRELD1Q96HD1 420 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 OSBPL10Q9BXB5 764 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 OR51V1Q9H2C8 321 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 GPRC5BQ9NZH0 403 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 CACNA1CQ13936 2221 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 RPS15AP62244 130 aaKnown RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 GRIK2Q13002 908 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 BTBD16Q32M84 506 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ARHGAP40Q5TG30 622 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 FAM219BQ5XKK7 198 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF486Q96H40 463 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ALPK1Q96QP1 1244 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 C17orf62Q9BQA9 187 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF717Q9BY31 904 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 OR51E2Q9H255 320 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF282Q9UDV7 671 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 RARRES3Q9UL19 164 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 IQCMA0A1B0GVH7 501 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 TMEM150CB9EJG8 249 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 E7EQ34 232 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 TNFRSF10AO00220 468 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 UBFD1O14562 309 aaKnown RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 CAPN5O15484 640 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 CD40LGP29965 261 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 CCR4P51679 360 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 B4GALNT1Q00973 533 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 DEFB110Q30KQ9 67 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 SPIN4Q56A73 249 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 CATSPEREQ5SY80 951 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 RNF44Q7L0R7 432 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 CSNK1A1LQ8N752 337 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 NUDT8Q8WV74 236 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 RASSF5Q8WWW0 418 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 UFD1Q92890 307 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 CPNE5Q9HCH3 593 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 IL1RAPQ9NPH3 570 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 PCDHGB6Q9Y5F9 930 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 N6AMT1Q9Y5N5 214 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 MTCL1Q9Y4B5 1905 aaKnown RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 SLC9B1P1A6NJY1 282 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 NT5EP21589 574 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 PTGS2P35354 604 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 STAT5AP42229 794 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF267Q14586 743 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ZNHIT3Q15649 155 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 COQ5Q5HYK3 327 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 ATG9BQ674R7 924 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 NOXRED1Q6NXP6 359 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 FAM83HQ6ZRV2 1179 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-201ENST00000334136 MARCH9Q86YJ5 346 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 PHC2Q8IXK0 858 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 OR13F1Q8NGS4 319 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 PROKR1Q8TCW9 393 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 NEIL2Q969S2 332 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 INPP5KQ9BT40 448 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 EDEM2Q9BV94 578 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 BRINP2Q9C0B6 783 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
HDAC6-201ENST00000334136 DOCK8Q8NF50 2099 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 A0A0J9YY10 115 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 UBE2QL1A1L167 161 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 ALPLP05186 524 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 PIM1P11309 404 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 PVRP15151 417 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 PCSK2P16519 638 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 GABARAPL2P60520 117 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 PLK5Q496M5 336 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF613Q6PF04 617 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 TBPL2Q6SJ96 375 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 LCTLQ6UWM7 567 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms