RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 CAPN14A8MX76 684 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 RNASET2O00584 256 aaKnown RBP18.99■□□□□ 0.63
MRPL40-201ENST00000333130 MAN1A2O60476 641 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 SCN2BO60939 215 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 NCF2P19878 526 aaPredicted RBP18.99■□□□□ 0.63
MRPL40-201ENST00000333130 PTGER1P34995 402 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 TMED10P49755 219 aaKnown RBP18.99■□□□□ 0.63
MRPL40-201ENST00000333130 DCAF7P61962 342 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 PHC1P78364 1004 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 RCAN2Q14206 197 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 EXOSC7Q15024 291 aaKnown RBP18.99■□□□□ 0.63
MRPL40-201ENST00000333130 PGS1Q32NB8 556 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 TRMT12Q53H54 448 aaKnown RBP18.99■□□□□ 0.63
MRPL40-201ENST00000333130 OR4F3Q6IEY1 312 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 TMEM107Q6UX40 140 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 PIGWQ7Z7B1 504 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 CPSF7Q8N684 471 aaKnown RBP18.99■□□□□ 0.63
MRPL40-201ENST00000333130 TMEM178AQ8NBL3 297 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 C16orf52Q8NHV5 167 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 PSMA8Q8TAA3 256 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 TP53INP1Q96A56 240 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 LIN28AQ9H9Z2 209 aaKnown RBP18.99■□□□□ 0.63
MRPL40-201ENST00000333130 MRGBPQ9NV56 204 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 FAM120CQ9NX05 1096 aaKnown RBP18.99■□□□□ 0.63
MRPL40-201ENST00000333130 ANKRD10Q9NXR5 420 aa18.99■□□□□ 0.63
MRPL40-201ENST00000333130 NUP214P35658 2090 aaPredicted RBP18.98■□□□□ 0.63
MRPL40-201ENST00000333130 FAM234BA2RU67 622 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 TTLL8A6PVC2 850 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 C9JVG2 144 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 PLOD2O00469 737 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 C1QL1O75973 258 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 CBX7O95931 251 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 IL6P05231 212 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 PGRP06401 933 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 CD96P40200 585 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 MC3RP41968 323 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 PSPHP78330 225 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 INAQ16352 499 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 FHL5Q5TD97 284 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 ZNF551Q7Z340 670 aaPredicted RBP18.98■□□□□ 0.63
MRPL40-201ENST00000333130 FUNDC1Q8IVP5 155 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 FAM98AQ8NCA5 519 aaKnown RBP18.98■□□□□ 0.63
MRPL40-201ENST00000333130 VPS37AQ8NEZ2 397 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 RABEP2Q9H5N1 569 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 C3orf14Q9HBI5 128 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 NEUROD4Q9HD90 331 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 PCDHGB6Q9Y5F9 930 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 CSAG2Q9Y5P2 127 aa18.98■□□□□ 0.63
MRPL40-201ENST00000333130 A0A1W2PRB8 838 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 TMEM200CA6NKL6 621 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 SUV39H1O43463 412 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 SLC25A12O75746 678 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 FAM107AO95990 144 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 S100A3P33764 101 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 NR0B1P51843 470 aaKnown RBP18.97■□□□□ 0.63
MRPL40-201ENST00000333130 POLR2JP52435 117 aaKnown RBP18.97■□□□□ 0.63
MRPL40-201ENST00000333130 ZNHIT3Q15649 155 aaPredicted RBP18.97■□□□□ 0.63
MRPL40-201ENST00000333130 PLEKHN1Q494U1 663 aaPredicted RBP18.97■□□□□ 0.63
MRPL40-201ENST00000333130 PIGGQ5H8A4 983 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 ZNF766Q5HY98 468 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 SZRD1Q7Z422 152 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 CATSPER1Q8NEC5 780 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 OR7G2Q8NG99 324 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 OR5P2Q8WZ92 322 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 TRIM45Q9H8W5 580 aaPredicted RBP18.97■□□□□ 0.63
MRPL40-201ENST00000333130 TIMMDC1Q9NPL8 285 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 LUZP4Q9P127 313 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 CFAP46Q8IYW2 2715 aa18.97■□□□□ 0.63
MRPL40-201ENST00000333130 ACOX3O15254 700 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 CFLARO15519 480 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 SORBS2O94875 1100 aaKnown RBP18.96■□□□□ 0.63
MRPL40-201ENST00000333130 PSMG1O95456 288 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 SOX3P41225 446 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 DGKQP52824 942 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 PRR5P85299 388 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 ZNF155Q12901 538 aaPredicted RBP18.96■□□□□ 0.63
MRPL40-201ENST00000333130 DUSP8Q13202 625 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 ANXA8L1Q5VT79 327 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 BLOC1S3Q6QNY0 202 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 IL20RBQ6UXL0 311 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 MSANTD1Q6ZTZ1 278 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 OR2L13Q8N349 312 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 ELP4Q96EB1 424 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 MAGED4Q96JG8 741 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 SGCZQ96LD1 299 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 CCT8L2Q96SF2 557 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 SLC52A3Q9NQ40 469 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 SAR1AQ9NR31 198 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 SIRT3Q9NTG7 399 aaPredicted RBP18.96■□□□□ 0.63
MRPL40-201ENST00000333130 NTMQ9P121 344 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 MAP10Q9P2G4 905 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 PCDHGB4Q9UN71 923 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 C19orf53Q9UNZ5 99 aaPredicted RBP18.96■□□□□ 0.63
MRPL40-201ENST00000333130 KLF13Q9Y2Y9 288 aaPredicted RBP18.96■□□□□ 0.63
MRPL40-201ENST00000333130 PCDHGA10Q9Y5H3 936 aa18.96■□□□□ 0.63
MRPL40-201ENST00000333130 PRSS51A0A1B0GVH4 220 aa18.95■□□□□ 0.62
MRPL40-201ENST00000333130 SLC28A2O43868 658 aa18.95■□□□□ 0.62
MRPL40-201ENST00000333130 C6orf47O95873 294 aa18.95■□□□□ 0.62
MRPL40-201ENST00000333130 EFNA1P20827 205 aaPredicted RBP18.95■□□□□ 0.62
MRPL40-201ENST00000333130 CDK9P50750 372 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms