RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 A0A1W2PRQ8 180 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 SH3D21A4FU49 640 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 KRBA1A5PL33 1030 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 M0R082 166 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 CTSVO60911 334 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 GABRG2P18507 467 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 POLR2CP19387 275 aaPredicted RBP16.36■□□□□ 0.21
DDX28-201ENST00000332395 BUD31P41223 144 aaPredicted RBP16.36■□□□□ 0.21
DDX28-201ENST00000332395 EIF2B2P49770 351 aaKnown RBP16.36■□□□□ 0.21
DDX28-201ENST00000332395 YPEL5P62699 121 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 GPR18Q14330 331 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 LTB4RQ15722 352 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 TIGD6Q17RP2 521 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 PRAMEF8Q5VWM4 474 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 PRAMEF7Q5VXH5 474 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 OR6T1Q8NGN1 323 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 OR10G6Q8NH81 332 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 LGALS12Q96DT0 336 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 TM4SF19Q96DZ7 209 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 C10orf90Q96M02 699 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 OR2A5Q96R48 311 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 FNDC11Q9BVV2 318 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 TWSG1Q9GZX9 223 aa16.36■□□□□ 0.21
DDX28-201ENST00000332395 QRSL1Q9H0R6 528 aaKnown RBP16.36■□□□□ 0.21
DDX28-201ENST00000332395 SCN3AQ9NY46 2000 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 GSAPA4D1B5 854 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 TLR4O00206 839 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 CASC3O15234 703 aaKnown RBP16.35■□□□□ 0.21
DDX28-201ENST00000332395 P2RX6O15547 441 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 TNFSF14O43557 240 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 CNOT3O75175 753 aaKnown RBP16.35■□□□□ 0.21
DDX28-201ENST00000332395 IGFBP1P08833 259 aaPredicted RBP16.35■□□□□ 0.21
DDX28-201ENST00000332395 ADORA3P0DMS8 318 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 OPRL1P41146 370 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 TNFRSF17Q02223 184 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 TARDBPQ13148 414 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX28-201ENST00000332395 BCL2A1Q16548 175 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 Q6ZSR6 202 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 TRIM48Q8IWZ4 208 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 ZCCHC10Q8TBK6 192 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 DYNC2LI1Q8TCX1 351 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 ZNF675Q8TD23 568 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 KLHL6Q8WZ60 621 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 KAT2AQ92830 837 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 PINK1Q9BXM7 581 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 POLR2J3Q9H1A7 115 aaKnown RBP16.35■□□□□ 0.21
DDX28-201ENST00000332395 CLN6Q9NWW5 311 aa16.35■□□□□ 0.21
DDX28-201ENST00000332395 H3BN98 237 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 TOR1BO14657 336 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 ASNA1O43681 348 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 TPST2O60704 377 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 NME6O75414 186 aaPredicted RBP16.34■□□□□ 0.21
DDX28-201ENST00000332395 MAN2A2P49641 1150 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 XKP51811 444 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 ZNF846Q147U1 533 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 DGUOKQ16854 277 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 PODNL1Q6PEZ8 512 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 TMCO5AQ8N6Q1 288 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 MAN2C1Q9NTJ4 1040 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 ACTR10Q9NZ32 417 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 NDOR1Q9UHB4 597 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 DAPK2Q9UIK4 370 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 LRP4O75096 1905 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 OR6C74A6NCV1 312 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 EFCAB10A6NFE3 127 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 SLITRK5O94991 958 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 NADKO95544 446 aaPredicted RBP16.34■□□□□ 0.21
DDX28-201ENST00000332395 SEMA4FO95754 770 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 PTHP01270 115 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 IDUAP35475 653 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 CD300CQ08708 224 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 ILF3Q12906 894 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDX28-201ENST00000332395 IRF3Q14653 427 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 SUZ12Q15022 739 aaKnown RBP16.34■□□□□ 0.21
DDX28-201ENST00000332395 DEFB134Q4QY38 66 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 SLX4IPQ5VYV7 408 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 FCRL6Q6DN72 434 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 FIGLAQ6QHK4 219 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 HMGB4Q8WW32 186 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 GIMAP5Q96F15 307 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 VMP1Q96GC9 406 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 SH3YL1Q96HL8 342 aaPredicted RBP16.34■□□□□ 0.21
DDX28-201ENST00000332395 PRRC1Q96M27 445 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 IL4I1Q96RQ9 567 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 ALOXE3Q9BYJ1 711 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 ROGDIQ9GZN7 287 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 SLC38A1Q9H2H9 487 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 C6orf106Q9H6K1 298 aaPredicted RBP16.34■□□□□ 0.21
DDX28-201ENST00000332395 CNOT2Q9NZN8 540 aaKnown RBP16.34■□□□□ 0.21
DDX28-201ENST00000332395 KCMF1Q9P0J7 381 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 PHF11Q9UIL8 331 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 MMP17Q9ULZ9 603 aa16.34■□□□□ 0.21
DDX28-201ENST00000332395 EFCAB9A8MZ26 197 aa16.33■□□□□ 0.2
DDX28-201ENST00000332395 SMIM10L1P0DMW3 83 aa16.33■□□□□ 0.2
DDX28-201ENST00000332395 CPN2P22792 545 aa16.33■□□□□ 0.2
DDX28-201ENST00000332395 LRRC25Q8N386 305 aaPredicted RBP16.33■□□□□ 0.2
DDX28-201ENST00000332395 SCAIQ8N9R8 606 aa16.33■□□□□ 0.2
DDX28-201ENST00000332395 OR13H1Q8NG92 308 aa16.33■□□□□ 0.2
DDX28-201ENST00000332395 PATE1Q8WXA2 126 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms