RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 KCNK6Q9Y257 313 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 ZNF670-ZNF695F2Z2N8 137 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 ADAP00813 363 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 CXCR2P25025 360 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 TIE1P35590 1138 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 CAMK1Q14012 370 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 LTB4RQ15722 352 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 CLPPQ16740 277 aaPredicted RBP12.37□□□□□ -0.43
CLGN-201ENST00000325617 TIMM50Q3ZCQ8 353 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 PIP5KL1Q5T9C9 394 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 LINC01555Q8NAE3 123 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 C9orf43Q8TAL5 461 aaPredicted RBP12.37□□□□□ -0.43
CLGN-201ENST00000325617 RNFT2Q96EX2 444 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 MAGEB10Q96LZ2 347 aaPredicted RBP12.37□□□□□ -0.43
CLGN-201ENST00000325617 HCN2Q9UL51 889 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 CLEC4AQ9UMR7 237 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 CSNK1G3Q9Y6M4 447 aa12.37□□□□□ -0.43
CLGN-201ENST00000325617 SH3D21A4FU49 640 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 ANKRD34BA5PLL1 514 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 PLA2G10O15496 165 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 PIP5K1CO60331 668 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 PAPLNO95428 1278 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 HMGN2P05204 90 aaKnown RBP12.36□□□□□ -0.43
CLGN-201ENST00000325617 LAG3P18627 525 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 SSR2P43308 183 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 ST8SIA6P61647 398 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 FUT5Q11128 374 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 PDZK1Q5T2W1 519 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 NDUFAF5Q5TEU4 345 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 MND1Q9BWT6 205 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 MS4A8Q9BY19 250 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 OR52A5Q9H2C5 316 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 TRPV5Q9NQA5 729 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 SNX7Q9UNH6 387 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 IGLON5A6NGN9 336 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 CENPXA8MT69 81 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 AKR7A2O43488 359 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 PI15O43692 258 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 ACP5P13686 325 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 CELP19835 753 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 CTBP2P56545 445 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 CSTF1Q05048 431 aaKnown RBP12.36□□□□□ -0.43
CLGN-201ENST00000325617 LRRC32Q14392 662 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.36□□□□□ -0.43
CLGN-201ENST00000325617 C12orf73Q69YU5 71 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 ZNF544Q6NX49 715 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 NKAIN4Q8IVV8 208 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 OR4N5Q8IXE1 308 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 ZNF557Q8N988 423 aaPredicted RBP12.36□□□□□ -0.43
CLGN-201ENST00000325617 OR8J1Q8NGP2 316 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 SLC35G5Q96KT7 338 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 KATNB1Q9BVA0 655 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 SAP130Q9H0E3 1048 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 SAGE1Q9NXZ1 904 aa12.36□□□□□ -0.43
CLGN-201ENST00000325617 RPL36Q9Y3U8 105 aaKnown RBP12.36□□□□□ -0.43
CLGN-201ENST00000325617 A0A087WUU8 490 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 LOC102723532A0A0G2JNH3 316 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 HYKKA2RU49 373 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 FCMRO60667 390 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 CPNE3O75131 537 aaKnown RBP12.35□□□□□ -0.43
CLGN-201ENST00000325617 RB1P06400 928 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 PSKH1P11801 424 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 RHAGQ02094 409 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 SLC35F1Q5T1Q4 408 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 FAM27D1Q5T7N8 215 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 FCRLBQ6BAA4 426 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 BBS10Q8TAM1 723 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 CREB3L4Q8TEY5 395 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 OR5P2Q8WZ92 322 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 RAD51AP1Q96B01 352 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 EFHD2Q96C19 240 aaPredicted RBP12.35□□□□□ -0.43
CLGN-201ENST00000325617 BBS4Q96RK4 519 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 C19orf43Q9BQ61 176 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 NLKQ9UBE8 527 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 SEC14L4Q9UDX3 406 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 ATG4BQ9Y4P1 393 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 KIAA1549LQ6ZVL6 1849 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 CASKO14936 926 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 GNSP15586 552 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 TRHRP34981 398 aaPredicted RBP12.35□□□□□ -0.43
CLGN-201ENST00000325617 CHRNEQ04844 493 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 NOGQ13253 232 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 SMARCD3Q6STE5 483 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 LAPTM4BQ86VI4 370 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 AMZ2Q86W34 360 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 TMEFF1Q8IYR6 380 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 KRT78Q8N1N4 520 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 CXorf40BQ96DE9 158 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 FERD3LQ96RJ6 166 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 SLC7A5P2Q9GIP4 190 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 FZD3Q9NPG1 666 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 MBNL1Q9NR56 388 aaKnown RBP12.35□□□□□ -0.43
CLGN-201ENST00000325617 NDUFB11Q9NX14 153 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 MGAT4BQ9UQ53 548 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 GPSM3Q9Y4H4 160 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 A3GALT2U3KPV4 340 aa12.35□□□□□ -0.43
CLGN-201ENST00000325617 CNTRLQ7Z7A1 2325 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms