RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ZNF888P0CJ79 500 aaPredicted RBP20.13■□□□□ 0.81
LIMS2-201ENST00000324938 MMP11P24347 488 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 HTR4Q13639 388 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 ZNF404Q494X3 552 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 C19orf48Q6RUI8 117 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 RD3Q7Z3Z2 195 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 TRIM69Q86WT6 500 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 CCL4L1Q8NHW4 92 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 BMFQ96LC9 184 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 C10orf90Q96M02 699 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 FCRL4Q96PJ5 515 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 OR51E2Q9H255 320 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 SLC38A1Q9H2H9 487 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 CD93Q9NPY3 652 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 A3GALT2U3KPV4 340 aa20.13■□□□□ 0.81
LIMS2-201ENST00000324938 A6NCN8 305 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 KPNA4O00629 521 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 ACTR1BP42025 376 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 PSMD7P51665 324 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 ACTR1AP61163 376 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 KIR2DS3Q14952 304 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 RAB30Q15771 203 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 ZER1Q7Z7L7 766 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 WDR36Q8NI36 951 aaKnown RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 SNRNP27Q8WVK2 155 aaKnown RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 TSACCQ96A04 125 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 MRGPRX1Q96LB2 322 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 MGLLQ99685 303 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 MROQ9BYG7 248 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 DNAJC27Q9NZQ0 273 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 CALML5Q9NZT1 146 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 LIPT1Q9Y234 373 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 ARHGEF17Q96PE2 2063 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 HSMCR30P0CW71 290 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 DLX2Q07687 328 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 MED22Q15528 200 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 OCLNQ16625 522 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 MFSD4BQ5TF39 518 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 C1orf94Q6P1W5 598 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 IQCHQ86VS3 1027 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 KLHL6Q8WZ60 621 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 GIMAP5Q96F15 307 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 TRNT1Q96Q11 434 aaKnown RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 ROGDIQ9GZN7 287 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 MCOLN1Q9GZU1 580 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 QRSL1Q9H0R6 528 aaKnown RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 ARMC7Q9H6L4 198 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 EQTNQ9NQ60 294 aa20.12■□□□□ 0.81
LIMS2-201ENST00000324938 CCDC59Q9P031 241 aaKnown RBP20.12■□□□□ 0.81
LIMS2-201ENST00000324938 NARSO43776 548 aaKnown RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 TPST2O60704 377 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 SLC35G6P0C7Q6 338 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 ACADMP11310 421 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 HNRNPA2B1P22626 353 aaKnown RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 TNFRSF17Q02223 184 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 WDR53Q7Z5U6 358 aaPredicted RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 AMER2Q8N7J2 671 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 NR4A3Q92570 626 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 TM4SF19Q96DZ7 209 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 SLC6A18Q96N87 628 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 ARHGDIGQ99819 225 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 ACTRT3Q9BYD9 372 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 NXF2Q9GZY0 626 aaKnown RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 TMEM168Q9H0V1 697 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 DNAAF2Q9NVR5 837 aaKnown RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 LOC100506127A0A0U1RQW1 187 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 TNFRSF10CO14798 259 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 ALPPP05187 535 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 TNNI3P19429 210 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 ACSL1P33121 698 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 RHAGQ02094 409 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 OXA1LQ15070 435 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 LTB4RQ15722 352 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 PRRT3Q5FWE3 981 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 ZNF311Q5JNZ3 666 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 ENTPD8Q5MY95 495 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 NIPAL1Q6NVV3 410 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 FBXO42Q6P3S6 717 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 TCEANCQ8N8B7 351 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 POLDIP3Q9BY77 421 aaKnown RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 ANKRA2Q9H9E1 313 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 GIN1Q9NXP7 522 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 DAPK2Q9UIK4 370 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 PHF11Q9UIL8 331 aa20.11■□□□□ 0.81
LIMS2-201ENST00000324938 RPL36Q9Y3U8 105 aaKnown RBP20.11■□□□□ 0.81
LIMS2-201ENST00000324938 CSTF2P33240 577 aaKnown RBP eCLIP20.1■□□□□ 0.81
LIMS2-201ENST00000324938 IFITM3Q01628 133 aa20.1■□□□□ 0.81
LIMS2-201ENST00000324938 CHRNEQ04844 493 aa20.1■□□□□ 0.81
LIMS2-201ENST00000324938 ZNF91Q05481 1191 aa20.1■□□□□ 0.81
LIMS2-201ENST00000324938 TSTQ16762 297 aaKnown RBP20.1■□□□□ 0.81
LIMS2-201ENST00000324938 TIMM50Q3ZCQ8 353 aa20.1■□□□□ 0.81
LIMS2-201ENST00000324938 KIAA1324Q6UXG2 1013 aaKnown RBP20.1■□□□□ 0.81
LIMS2-201ENST00000324938 DGLUCYQ7Z3D6 616 aa20.1■□□□□ 0.81
LIMS2-201ENST00000324938 TRIM73Q86UV7 250 aa20.1■□□□□ 0.81
LIMS2-201ENST00000324938 KAT2AQ92830 837 aa20.1■□□□□ 0.81
LIMS2-201ENST00000324938 TMEM80Q96HE8 168 aa20.1■□□□□ 0.81
LIMS2-201ENST00000324938 OR2A14Q96R47 310 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms