RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PEAK1Q9H792 1746 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 VNN1O95497 513 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 KLK3P07288 261 aaPredicted RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 FPGSQ05932 587 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SERINC3Q13530 473 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 CES4AQ5XG92 561 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 NCBP2-AS2Q69YL0 99 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 REM2Q8IYK8 340 aaPredicted RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 RCBTB1Q8NDN9 531 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SLC22A17Q8WUG5 538 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 THAP4Q8WY91 577 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 GTF2H4Q92759 462 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 VRK1Q99986 396 aaPredicted RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 ZNF442Q9H7R0 627 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SRA1Q9HD15 236 aaKnown RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 PSAT1Q9Y617 370 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 RNF215Q9Y6U7 377 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 MPPED1O15442 326 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 DCNP07585 359 aaKnown RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 TRIM46Q7Z4K8 759 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 C12orf45Q8N5I9 185 aaPredicted RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 FAAHO00519 579 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 YY2O15391 372 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 H2BFMP0C1H6 154 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 UNGP13051 313 aaPredicted RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 NFATC3Q12968 1075 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 CAMKVQ8NCB2 501 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 ZFP90Q8TF47 636 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 FRS2Q8WU20 508 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 CLEC4EQ9ULY5 219 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 TYRP14679 529 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 IFNGR1P15260 489 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 DIO3P55073 304 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SNTA1Q13424 505 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 TMEM225Q6GV28 225 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 CMTM8Q8IZV2 173 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SLC32A1Q9H598 525 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 DUXAA6NLW8 204 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 HHLA1C9JL84 531 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 B4GAT1O43505 415 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 TNFRSF1BP20333 461 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 ETV4P43268 484 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 GPR4P46093 362 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 DEFA6Q01524 100 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 BDH1Q02338 343 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 PCGF3Q3KNV8 242 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 C6orf89Q6UWU4 347 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 RADILQ96JH8 1075 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 PSKH2Q96QS6 385 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 OR4K3Q96R72 315 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 PEBP4Q96S96 227 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SLC29A3Q9BZD2 475 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SLC38A1Q9H2H9 487 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 NME7Q9Y5B8 376 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 AKAP11Q9UKA4 1901 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 EDDM13A0A1B0GTR0 161 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 HPGDSO60760 199 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 RFPL3O75679 317 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 GIFP27352 417 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 FKBP1AP62942 108 aaKnown RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 SLX4IPQ5VYV7 408 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 ZNF776Q68DI1 518 aaPredicted RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 ZNF100Q8IYN0 542 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 KLRG1Q96E93 195 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 LRR1Q96L50 414 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 RNF39Q9H2S5 420 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 RXFP3Q9NSD7 469 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 ADRB3P13945 408 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 S1PR1P21453 382 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 OR4D2P58180 307 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 C18orf21Q32NC0 220 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 RAET1LQ5VY80 246 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 C3P1Q6ZMU1 363 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SAMD14Q8IZD0 417 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 LILRB4Q8NHJ6 448 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PGAM5Q96HS1 289 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 HSD3B7Q9H2F3 369 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ARMC1Q9NVT9 282 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 TEX10Q9NXF1 929 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 TEX264Q9Y6I9 313 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PRKCAP17252 672 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 OXTRP30559 389 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PLGLAQ15195 96 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ADGRF1Q5T601 910 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 FAM205BPQ63HN1 556 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PXKQ7Z7A4 578 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ATE1O95260 518 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 CSNK2A1P68400 391 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 FAM189BP81408 668 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PCLAFQ15004 111 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 C18orf63Q68DL7 685 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PAPD4Q6PIY7 484 aaKnown RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 FAM109AQ8N4B1 249 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 CSNK2A3Q8NEV1 391 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 NRG4Q8WWG1 115 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 FAM46BQ96A09 425 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 RRNAD1Q96FB5 475 aaKnown RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 OR51E2Q9H255 320 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 CCM2LQ9NUG4 571 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms