RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 TECRLQ5HYJ1 363 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 CYP20A1Q6UW02 462 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 PACS2Q86VP3 889 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 NUDT13Q86X67 352 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 MYLK4Q86YV6 388 aaPredicted RBP12.99□□□□□ -0.33
RPP40-201ENST00000319533 GALNT12Q8IXK2 581 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 ZPLD1Q8TCW7 415 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 AENQ8WTP8 325 aaKnown RBP12.99□□□□□ -0.33
RPP40-201ENST00000319533 GPR78Q96P69 363 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 HS3ST6Q96QI5 342 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 EPB41L4BQ9H329 900 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 PLEKHF2Q9H8W4 249 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 ACTR8Q9H981 624 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 XPR1Q9UBH6 696 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 KIAA1549Q9HCM3 1950 aa12.99□□□□□ -0.33
RPP40-201ENST00000319533 DOCK7Q96N67 2140 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 EXPH5Q8NEV8 1989 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 ABCB1P08183 1280 aaPredicted RBP12.98□□□□□ -0.33
RPP40-201ENST00000319533 ABCD3P28288 659 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 PTPN6P29350 595 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 NRG3P56975 720 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 CPSF6Q16630 551 aaKnown RBP eCLIP12.98□□□□□ -0.33
RPP40-201ENST00000319533 EIPR1Q53HC9 387 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 DCST1Q5T197 706 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 HLA-DQA1Q5Y7H0 255 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 TIGD3Q6B0B8 471 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 MMP21Q8N119 569 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 PLD6Q8N2A8 252 aaKnown RBP12.98□□□□□ -0.33
RPP40-201ENST00000319533 PTGR2Q8N8N7 351 aaPredicted RBP12.98□□□□□ -0.33
RPP40-201ENST00000319533 OR7G1Q8NGA0 311 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 OR10A5Q9H207 317 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 IPPKQ9H8X2 491 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 TEX10Q9NXF1 929 aaPredicted RBP12.98□□□□□ -0.33
RPP40-201ENST00000319533 PSMC3IPQ9P2W1 217 aaPredicted RBP12.98□□□□□ -0.33
RPP40-201ENST00000319533 CAMK2AQ9UQM7 478 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 SLC6A5Q9Y345 797 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 RNF11Q9Y3C5 154 aa12.98□□□□□ -0.33
RPP40-201ENST00000319533 LRRC14BA6NHZ5 514 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 DYNC1I1O14576 645 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 ACTL6AO96019 429 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 CPN1P15169 458 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 GPX3P22352 226 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 PIK3R1P27986 724 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 HOXC12P31275 282 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 ARL1P40616 181 aaPredicted RBP12.97□□□□□ -0.33
RPP40-201ENST00000319533 MASP1P48740 699 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 NEK2P51955 445 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 NAGLUP54802 743 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 GTF2H2Q13888 395 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 SLC29A2Q14542 456 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 WIPI1Q5MNZ9 446 aaPredicted RBP12.97□□□□□ -0.33
RPP40-201ENST00000319533 GTF2H2CQ6P1K8 395 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 TIFABQ6ZNK6 161 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 GOLGA7Q7Z5G4 137 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 ADGRE4PQ86SQ3 457 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 OR4K14Q8NGD5 310 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.97□□□□□ -0.33
RPP40-201ENST00000319533 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
RPP40-201ENST00000319533 UCN2Q96RP3 112 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 TRIB1Q96RU8 372 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 SERPINI1Q99574 410 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
RPP40-201ENST00000319533 TXLNGYQ9BZA5 131 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 MRPL46Q9H2W6 279 aaKnown RBP12.97□□□□□ -0.33
RPP40-201ENST00000319533 ADAM29Q9UKF5 820 aa12.97□□□□□ -0.33
RPP40-201ENST00000319533 NSD1Q96L73 2696 aaPredicted RBP12.97□□□□□ -0.33
RPP40-201ENST00000319533 CCDC151A5D8V7 595 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 CLCA1A8K7I4 914 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 STX16-NPEPL1H3BU86 382 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 STX16O14662 325 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 PPM1BO75688 479 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 SIX3O95343 332 aaPredicted RBP12.96□□□□□ -0.33
RPP40-201ENST00000319533 CLDN9O95484 217 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 GBAP04062 536 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 HRGP04196 525 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 CPMP14384 443 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 GCAP28676 217 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 PTGDSP41222 190 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 XKP51811 444 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 MGAT2Q10469 447 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 MAP4K2Q12851 820 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 SNTA1Q13424 505 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 C10orf62Q5T681 223 aaPredicted RBP12.96□□□□□ -0.33
RPP40-201ENST00000319533 SLC30A6Q6NXT4 461 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 NUP54Q7Z3B4 507 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 BIVMQ86UB2 503 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 LCA5Q86VQ0 697 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 KRTAP1-3Q8IUG1 177 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 C9orf106Q8NAJ2 232 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 FAM83FQ8NEG4 500 aaPredicted RBP12.96□□□□□ -0.33
RPP40-201ENST00000319533 OR1J4Q8NGS1 313 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 LINC01560Q8TB33 94 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 UBLCP1Q8WVY7 318 aaPredicted RBP12.96□□□□□ -0.33
RPP40-201ENST00000319533 HGDQ93099 445 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 ATP6V1E2Q96A05 226 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 PHF21BQ96EK2 531 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 ZFP3Q96NJ6 502 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 DACH2Q96NX9 599 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 NXF5Q9H1B4 397 aaKnown RBP12.96□□□□□ -0.33
RPP40-201ENST00000319533 ZNF639Q9UID6 485 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms