RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 SORBS2O94875 1100 aaKnown RBP25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 SOX11P35716 441 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 TRIM25Q14258 630 aaKnown RBP25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 ZNHIT3Q15649 155 aaPredicted RBP25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 C1orf146Q5VVC0 180 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 PAPD4Q6PIY7 484 aaKnown RBP25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 RNF111Q6ZNA4 994 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 MICU2Q8IYU8 434 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 CDRT4Q8N9R6 151 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 SIMC1Q8NDZ2 872 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 MIPOL1Q8TD10 442 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 SLC9A6Q92581 669 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 GIMAP5Q96F15 307 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 GMPR2Q9P2T1 348 aaKnown RBP25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 CFL2Q9Y281 166 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 SDK2Q58EX2 2172 aa25.55■■□□□ 1.68
CTDNEP1-201ENST00000318988 TRABD2BA6NFA1 517 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 SAGE2PA6NJ88 616 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 MMP11P24347 488 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 RPS18P62269 152 aaKnown RBP25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 EEF1A2Q05639 463 aaKnown RBP25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 SSPNQ14714 243 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 CDC73Q6P1J9 531 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 NET1Q7Z628 596 aaPredicted RBP25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 C10orf111Q8N326 155 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 C11orf65Q8NCR3 313 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 FBXO30Q8TB52 745 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 XAGE5Q8WWM1 108 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 C8orf44Q96CB5 159 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 ASB9Q96DX5 294 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 WDR70Q9NW82 654 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 KLK13Q9UKR3 277 aa25.54■■□□□ 1.68
CTDNEP1-201ENST00000318988 LOC101059948A0A1B0GTJ6 334 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 TNFRSF21O75509 655 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 PSMG1O95456 288 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 DDAH2O95865 285 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 AGR2O95994 175 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 ALOX5P09917 674 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 OR12D1P0DN82 309 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 GZMMP51124 257 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 ATAD3BQ5T9A4 648 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 OR5D16Q8NGK9 328 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 VPS50Q96JG6 964 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 MUC13Q9H3R2 512 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 EGFL7Q9UHF1 273 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 USP22Q9UPT9 525 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 POMPQ9Y244 141 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 HEMK1Q9Y5R4 338 aaPredicted RBP25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 LOC102723996A0A087X1L8 192 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 H0YHG0 523 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 SOX30O94993 753 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 NUDT7P0C024 238 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 LIPCP11150 499 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 BMP2P12643 396 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 OTX2P32243 289 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 RBBP4Q09028 425 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 DTX1Q86Y01 620 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 ZZZ3Q8IYH5 903 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 LGI4Q8N135 537 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 OR1N1Q8NGS0 311 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 ZNF721Q8TF20 911 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 RAB8BQ92930 207 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 OR7D2Q96RA2 312 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 PCDHAC1Q9H158 963 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 SERHL2Q9H4I8 314 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 TMEM38AQ9H6F2 299 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 GPN2Q9H9Y4 310 aaPredicted RBP25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 EXD2Q9NVH0 621 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 PCDHGB3Q9Y5G1 929 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 SNX13Q9Y5W8 968 aa25.53■■□□□ 1.68
CTDNEP1-201ENST00000318988 HMGN4O00479 90 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 ASNA1O43681 348 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 SEC24DO94855 1032 aaPredicted RBP25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 EMDP50402 254 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 TRAP1Q12931 704 aaKnown RBP25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 ZNF630Q2M218 657 aaPredicted RBP25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 VMACQ2NL98 169 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 ZNF615Q8N8J6 731 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 FAM13CQ8NE31 585 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 B3GNT7Q8NFL0 401 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 OTUB1Q96FW1 271 aaPredicted RBP25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 FOLH1BQ9HBA9 442 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 P2RX2Q9UBL9 471 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 MAGEL2Q9UJ55 1249 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 HS3ST3B1Q9Y662 390 aa25.52■■□□□ 1.68
CTDNEP1-201ENST00000318988 C5orf58C9J3I9 102 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 NME6O75414 186 aaPredicted RBP25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 IGKV3-11P04433 115 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 PLA2G5P39877 138 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 SLC37A1P57057 533 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 DUSP8Q13202 625 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 FLOT2Q14254 428 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 GNA13Q14344 377 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 WDR53Q7Z5U6 358 aaPredicted RBP25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 DHFR2Q86XF0 187 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 PROSER1Q86XN7 944 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 PTOV1Q86YD1 416 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 SLC44A2Q8IWA5 706 aaPredicted RBP25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 SLC30A8Q8IWU4 369 aa25.51■■□□□ 1.67
CTDNEP1-201ENST00000318988 SLC16A11Q8NCK7 471 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms