RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FAM83HQ6ZRV2 1179 aaPredicted RBP18■□□□□ 0.47
RTN4-201ENST00000317610 ANKK1Q8NFD2 765 aa18■□□□□ 0.47
RTN4-201ENST00000317610 MARVELD1Q9BSK0 173 aa18■□□□□ 0.47
RTN4-201ENST00000317610 SAP130Q9H0E3 1048 aa18■□□□□ 0.47
RTN4-201ENST00000317610 SLC43A1O75387 559 aa18■□□□□ 0.47
RTN4-201ENST00000317610 UBXN7O94888 489 aa18■□□□□ 0.47
RTN4-201ENST00000317610 NR2F1P10589 423 aa18■□□□□ 0.47
RTN4-201ENST00000317610 PPP2R1BP30154 601 aa18■□□□□ 0.47
RTN4-201ENST00000317610 CD79BP40259 229 aa18■□□□□ 0.47
RTN4-201ENST00000317610 SLC6A11P48066 632 aa18■□□□□ 0.47
RTN4-201ENST00000317610 GPLD1P80108 840 aa18■□□□□ 0.47
RTN4-201ENST00000317610 SLC27A4Q6P1M0 643 aa18■□□□□ 0.47
RTN4-201ENST00000317610 DEFB128Q7Z7B8 93 aa18■□□□□ 0.47
RTN4-201ENST00000317610 GLCCI1Q86VQ1 547 aa18■□□□□ 0.47
RTN4-201ENST00000317610 CADM2Q8N3J6 435 aa18■□□□□ 0.47
RTN4-201ENST00000317610 TEX47Q8TBZ9 253 aa18■□□□□ 0.47
RTN4-201ENST00000317610 SLC9A6Q92581 669 aa18■□□□□ 0.47
RTN4-201ENST00000317610 SPATA5L1Q9BVQ7 753 aa18■□□□□ 0.47
RTN4-201ENST00000317610 EGLN3Q9H6Z9 239 aa18■□□□□ 0.47
RTN4-201ENST00000317610 TAS2R7Q9NYW3 318 aa18■□□□□ 0.47
RTN4-201ENST00000317610 COL4A3Q01955 1670 aa18■□□□□ 0.47
RTN4-201ENST00000317610 K7ESM1 405 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 SPINT1O43278 529 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 TMPRSS11DO60235 418 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 CPNE3O75131 537 aaKnown RBP17.99■□□□□ 0.47
RTN4-201ENST00000317610 POP7O75817 140 aaKnown RBP17.99■□□□□ 0.47
RTN4-201ENST00000317610 MYCP01106 439 aaPredicted RBP17.99■□□□□ 0.47
RTN4-201ENST00000317610 ERGP11308 486 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 KELP23276 732 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 NNMTP40261 264 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 ACSM1Q08AH1 577 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 SF3A2Q15428 464 aaKnown RBP17.99■□□□□ 0.47
RTN4-201ENST00000317610 TRILQ7L0X0 811 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 C17orf64Q86WR6 236 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 POGLUT1Q8NBL1 392 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 OR5D16Q8NGK9 328 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 OR8D4Q8NGM9 314 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 OR2L2Q8NH16 312 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 TTC9Q92623 222 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 RAD51AP1Q96B01 352 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 UPRTQ96BW1 309 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 ZNF514Q96K75 400 aaPredicted RBP17.99■□□□□ 0.47
RTN4-201ENST00000317610 AIF1LQ9BQI0 150 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 GTPBP2Q9BX10 602 aaKnown RBP17.99■□□□□ 0.47
RTN4-201ENST00000317610 OR52A5Q9H2C5 316 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 WASH6PQ9NQA3 447 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 SPHK2Q9NRA0 654 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 LALBAP00709 142 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 HTR2BP41595 481 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 SLC1A3P43003 542 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 MADCAM1Q13477 382 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 NFE2L1Q14494 772 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 NUDT13Q86X67 352 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 ANGPTL6Q8NI99 470 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 GNPDA2Q8TDQ7 276 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 PXYLP1Q8TE99 480 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 XAGE5Q8WWM1 108 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 TEX10Q9NXF1 929 aaPredicted RBP17.99■□□□□ 0.47
RTN4-201ENST00000317610 ADAM29Q9UKF5 820 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 PLAGL1Q9UM63 463 aa17.99■□□□□ 0.47
RTN4-201ENST00000317610 FAM240BA0A1B0GVZ2 78 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 CFL1P23528 166 aaKnown RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 SOX18P35713 384 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 CCR2P41597 374 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 ABATP80404 500 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 ZNF155Q12901 538 aaPredicted RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 TYW3Q6IPR3 259 aaKnown RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 ZNF765Q7L2R6 523 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 ABI3BPQ7Z7G0 1075 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 C2orf73Q8N5S3 287 aaPredicted RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 CHFRQ96EP1 664 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 SENP5Q96HI0 755 aaPredicted RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 SLC38A2Q96QD8 506 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 DCLRE1CQ96SD1 692 aaKnown RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 ACAT2Q9BWD1 397 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 PRRG3Q9BZD7 231 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 IRF2BPLQ9H1B7 796 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 KCNK12Q9HB15 430 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 ING3Q9NXR8 418 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 POLHQ9Y253 713 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 A0A087WUU8 490 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 A0A0X1KG70 313 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 CASC3O15234 703 aaKnown RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 ARHGEF9O43307 516 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 INHAP05111 366 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 VASPP50552 380 aaPredicted RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 P2RX3P56373 397 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 RRAS2P62070 204 aaPredicted RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 REEP5Q00765 189 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 DSG2Q14126 1118 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 WSCD2Q2TBF2 565 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 FAM209AQ5JX71 171 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 PRICKLE2Q7Z3G6 844 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 ZFP41Q8N8Y5 198 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 OR5AR1Q8NGP9 310 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 DEDD2Q8WXF8 326 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 ZNF649Q9BS31 505 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 LINC00597Q9H2U6 94 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 GLIPR2Q9H4G4 154 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 C11orf49Q9H6J7 331 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms