RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 OR52R1Q8NGF1 315 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 MZB1Q8WU39 189 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 TMEM41AQ96HV5 264 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 GNRHR2Q96P88 292 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 ITPAQ9BY32 194 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 PLLPQ9Y342 182 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 TIMM22Q9Y584 194 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 A0A1W2PPM1 405 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 CRCPO75575 148 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 CBX7O95931 251 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 HPNP05981 417 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 MSX1P28360 303 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 MPIP34949 423 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 CDK9P50750 372 aaKnown RBP16.26■□□□□ 0.19
TPM1-203ENST00000317516 PSPHP78330 225 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 HMGCS1Q01581 520 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 TLE4Q04727 773 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 BTKQ06187 659 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 PLCXD2Q0VAA5 305 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 SNTA1Q13424 505 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 TOMM20Q15388 145 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 IMPG1Q17R60 797 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 ERCC6LQ2NKX8 1250 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 RIPPLY2Q5TAB7 128 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 BICRALQ6AI39 1079 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 TIGD3Q6B0B8 471 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 TMEM81Q6P7N7 255 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 GALNT18Q6P9A2 607 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 ULK2Q8IYT8 1036 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 OR1J4Q8NGS1 313 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 ZNF675Q8TD23 568 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 C16orf78Q8WTQ4 265 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 UBLCP1Q8WVY7 318 aaPredicted RBP16.26■□□□□ 0.19
TPM1-203ENST00000317516 OMA1Q96E52 524 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 APIPQ96GX9 242 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 EPB41L4BQ9H329 900 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 GSTO2Q9H4Y5 243 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 MCCC2Q9HCC0 563 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 SIRT5Q9NXA8 310 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 EHD3Q9NZN3 535 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 HEY2Q9UBP5 337 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 DTX4Q9Y2E6 619 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 C15orf41Q9Y2V0 281 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 DNAJC13O75165 2243 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 APCP25054 2843 aa16.26■□□□□ 0.19
TPM1-203ENST00000317516 A0A0G2JNJ9 132 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 HSPB2A8KAH6 182 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 ANXA4P09525 319 aaPredicted RBP16.25■□□□□ 0.19
TPM1-203ENST00000317516 PCSK2P16519 638 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 IGFBP2P18065 325 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 TIA1P31483 386 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM1-203ENST00000317516 GCKP35557 465 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 EMDP50402 254 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 HTR6P50406 440 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 NAGLUP54802 743 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 RAE1P78406 368 aaKnown RBP16.25■□□□□ 0.19
TPM1-203ENST00000317516 TFF3Q07654 80 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 LTB4RQ15722 352 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 HSPB2Q16082 182 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 NNATQ16517 81 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 SLC25A35Q3KQZ1 300 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 FAM180BQ6P0A1 224 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 TDRPQ86YL5 185 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 RDH11Q8TC12 318 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM1-203ENST00000317516 EXOSC8Q96B26 276 aaKnown RBP16.25■□□□□ 0.19
TPM1-203ENST00000317516 TMCO6Q96DC7 493 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 DTNBP1Q96EV8 351 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 UBQLN3Q9H347 655 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 SLC35C2Q9NQQ7 365 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 NPDC1Q9NQX5 325 aaPredicted RBP16.25■□□□□ 0.19
TPM1-203ENST00000317516 Q9UFV3 132 aa16.25■□□□□ 0.19
TPM1-203ENST00000317516 WBP11Q9Y2W2 641 aaKnown RBP16.25■□□□□ 0.19
TPM1-203ENST00000317516 FRG2CA6NGY1 282 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 G3V2L1 256 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 TO15178 435 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 ABCB7O75027 752 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 CRHR1P34998 444 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 KRT20P35900 424 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 DNAJB13P59910 316 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 MRPS35P82673 323 aaKnown RBP16.24■□□□□ 0.19
TPM1-203ENST00000317516 DUSP2Q05923 314 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 ZNF628Q5EBL2 1059 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 SCIMPQ6UWF3 145 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 DMRTC2Q8IXT2 367 aaPredicted RBP16.24■□□□□ 0.19
TPM1-203ENST00000317516 GSPT2Q8IYD1 628 aaKnown RBP16.24■□□□□ 0.19
TPM1-203ENST00000317516 CCDC63Q8NA47 563 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 HGDQ93099 445 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 C11orf24Q96F05 449 aaPredicted RBP16.24■□□□□ 0.19
TPM1-203ENST00000317516 BBS4Q96RK4 519 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 KCNA7Q96RP8 456 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 TIMP4Q99727 224 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 STMN4Q9H169 189 aaPredicted RBP16.24■□□□□ 0.19
TPM1-203ENST00000317516 RRAGDQ9NQL2 400 aaPredicted RBP16.24■□□□□ 0.19
TPM1-203ENST00000317516 KLRF1Q9NZS2 232 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 SENP1Q9P0U3 644 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 EMCNQ9ULC0 261 aa16.24■□□□□ 0.19
TPM1-203ENST00000317516 GPR55Q9Y2T6 319 aaPredicted RBP16.24■□□□□ 0.19
TPM1-203ENST00000317516 OR6C70A6NIJ9 312 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 COPEO14579 308 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms