RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 CELA2BP08218 269 aaPredicted RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 NME1P15531 152 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 CHMP24386 653 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 LIPAP38571 399 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 KCNJ5P48544 419 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 LIM2P55344 173 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 TMEM236Q5W0B7 351 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 ZC3H14Q6PJT7 736 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 USP43Q70EL4 1123 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 UBE3DQ7Z6J8 389 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 FAM46DQ8NEK8 389 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 ZFPM2Q8WW38 1151 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 BBS4Q96RK4 519 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 UCK2Q9BZX2 261 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 DCSTAMPQ9H295 470 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 MRPS30Q9NP92 439 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 DNAAF2Q9NVR5 837 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 TEX10Q9NXF1 929 aaPredicted RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 SELENONQ9NZV5 590 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 C5AR2Q9P296 337 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 FTSJ1Q9UET6 329 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 CACNA1HO95180 2353 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 VPS13AQ96RL7 3174 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 OSMP13725 252 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 CTSEP14091 401 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 POU1F1P28069 291 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 CSNK1EP49674 416 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 SLC9A5Q14940 896 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 ZNF770Q6IQ21 691 aaPredicted RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 BHLHB9Q6PI77 547 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 ZNF367Q7RTV3 350 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 SLC46A3Q7Z3Q1 461 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 B3GNT7Q8NFL0 401 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 KBTBD8Q8NFY9 601 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 GPR32P1Q8NGA4 272 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 OR2A1Q8NGT9 310 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 MCFD2Q8NI22 146 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 CREB3L4Q8TEY5 395 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 PIGKQ92643 395 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 RPL3LQ92901 407 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 Q96MT0 163 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 DPH7Q9BTV6 452 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 LRRC61Q9BV99 259 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 SPATA5L1Q9BVQ7 753 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 SLC35C2Q9NQQ7 365 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 OR6C2Q9NZP2 312 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 APOBEC3BQ9UH17 382 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 DAPK2Q9UIK4 370 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 TDRD6O60522 2096 aaKnown RBP13.34□□□□□ -0.27
VRK3-201ENST00000316763 KIR2DS5A0A0G2JLQ3 304 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 A0A0G2JNG1 304 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 LRIT2A6NDA9 550 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 OR5K4A6NMS3 321 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 KIR2DS3K7RE56 304 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 FFAR1O14842 300 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 ADORA3P0DMS8 318 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 NR2F1P10589 423 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 KHKP50053 298 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 UGT2B15P54855 530 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 NXPH1P58417 271 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 UBE2IP63279 158 aaKnown RBP13.34□□□□□ -0.27
VRK3-201ENST00000316763 ABATP80404 500 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 FOXD4Q12950 439 aaPredicted RBP13.34□□□□□ -0.27
VRK3-201ENST00000316763 GNA13Q14344 377 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 IRF3Q14653 427 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 KIR2DS5Q14953 304 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 PRRT3Q5FWE3 981 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 NDUFAF5Q5TEU4 345 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 DEF8Q6ZN54 512 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 SZRD1Q7Z422 152 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 TAF8Q7Z7C8 310 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 DHRS1Q96LJ7 313 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 C17orf62Q9BQA9 187 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 SLIRPQ9GZT3 109 aaKnown RBP13.34□□□□□ -0.27
VRK3-201ENST00000316763 MMP27Q9H306 513 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 OR51I1Q9H343 314 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 SEMA3GQ9NS98 782 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 TRPC4Q9UBN4 977 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 PMF1-BGLAPU3KQ54 211 aa13.34□□□□□ -0.27
VRK3-201ENST00000316763 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 OR10H3O60404 316 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 OR12D1P0DN82 309 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 GNSP15586 552 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 GADD45AP24522 165 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 ELAVL4P26378 380 aaKnown RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 BCAP31P51572 246 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 AFF3P51826 1226 aaKnown RBP13.33□□□□□ -0.28
VRK3-201ENST00000316763 NCBP2P52298 156 aaKnown RBP eCLIP13.33□□□□□ -0.28
VRK3-201ENST00000316763 ARFIP1P53367 373 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 ILKQ13418 452 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 ARMCX4Q5H9R4 360 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 TCTN3Q6NUS6 607 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 AMIGO1Q86WK6 493 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 MFSD4AQ8N468 514 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 AMER2Q8N7J2 671 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 BBS10Q8TAM1 723 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 SFXN5Q8TD22 340 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 XAGE5Q8WWM1 108 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 LCN9Q8WX39 176 aa13.33□□□□□ -0.28
VRK3-201ENST00000316763 AMDHD1Q96NU7 426 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms