RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 OLIG2Q13516 323 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 TLDC1Q6P9B6 456 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 PIWIL3Q7Z3Z3 882 aaKnown RBP7.81□□□□□ -1.16
VPS41-202ENST00000310301 IGDCC3Q8IVU1 814 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 FAM109AQ8N4B1 249 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 TEX19Q8NA77 164 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 FIBINQ8TAL6 211 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 SMPDL3BQ92485 455 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CNOT9Q92600 299 aaKnown RBP7.81□□□□□ -1.16
VPS41-202ENST00000310301 NSMAFQ92636 917 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 PRR11Q96HE9 360 aaPredicted RBP7.81□□□□□ -1.16
VPS41-202ENST00000310301 NEDD4LQ96PU5 975 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ENY2Q9NPA8 101 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 UTS2RQ9UKP6 389 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 PCDHB14Q9Y5E9 798 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 A0A1W2PP55 124 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 OR6C6A6NF89 314 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 BLOC1S5-TXNDC5H3BN57 136 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 ADAMTS3O15072 1205 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 KDELR3O43731 214 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 IFNA4P05014 189 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CHRNB1P11230 501 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 DRD5P21918 477 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CERS1P27544 350 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 GDF5P43026 501 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 LRP8Q14114 963 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 LRRTM4Q86VH4 590 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 TMEM185AQ8NFB2 350 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 OR8J3Q8NGG0 315 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 CMTM7Q96FZ5 175 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 POTEKPQ9BYX7 375 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 UNKLQ9H9P5 680 aaKnown RBP7.81□□□□□ -1.16
VPS41-202ENST00000310301 GPR83Q9NYM4 423 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 WDR45Q9Y484 360 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 MTCH2Q9Y6C9 303 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 COL11A2P13942 1736 aaPredicted RBP7.81□□□□□ -1.16
VPS41-202ENST00000310301 ARFGEF1Q9Y6D6 1849 aa7.81□□□□□ -1.16
VPS41-202ENST00000310301 A0A1B0GVI7 797 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 A0A1W2PQL4 384 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 ALDOBP05062 364 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ZFP41Q8N8Y5 198 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 GDPD1Q8N9F7 314 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 GOLM1Q8NBJ4 401 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ZNF516Q92618 1163 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ZDHHC12Q96GR4 267 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 HDHD5Q9BXW7 423 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ZBTB20Q9HC78 741 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 ACTR10Q9NZ32 417 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 GRHPRQ9UBQ7 328 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 DUX1O43812 170 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 IFNA10P01566 189 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 IDH3GP51553 393 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 DIO3P55073 304 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SLC26A5P58743 744 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 RAB4BP61018 213 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 NPRL3Q12980 569 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 LRRC73Q5JTD7 316 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 TAS1R3Q7RTX0 852 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 WDR53Q7Z5U6 358 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 KLBQ86Z14 1044 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 WDSUB1Q8N9V3 476 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 GTF2H4Q92759 462 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 MALSU1Q96EH3 234 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 LRRC46Q96FV0 321 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 KLHL15Q96M94 604 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 CCM2Q9BSQ5 444 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 MKS1Q9NXB0 559 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 TEX10Q9NXF1 929 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 GPR34Q9UPC5 381 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 BCAT2O15382 392 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 ACVR1BP36896 505 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 AQP2P41181 271 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 CDKN1CP49918 316 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 HK3P52790 923 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 TRAM2Q15035 370 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 TAS1R1Q7RTX1 841 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 THOC6Q86W42 341 aaKnown RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 HS3ST5Q8IZT8 346 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ZNF527Q8NB42 609 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 BEST4Q8NFU0 473 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 OR7G1Q8NGA0 311 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SHISA4Q96DD7 197 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SLC25A44Q96H78 314 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 ORAI3Q9BRQ5 295 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SLC46A2Q9BY10 475 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ZNF436Q9C0F3 470 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 LRFN1Q9P244 771 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SLC6A14Q9UN76 642 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 A0A1W2PQU0 124 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 NPIPA5E9PKD4 350 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SULT1C2O00338 296 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SOCS5O75159 536 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SLC34A2O95436 690 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 GBAP04062 536 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 LCKP06239 509 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 JUNDP17535 347 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 HNRNPA2B1P22626 353 aaKnown RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 ATP5A1P25705 553 aaKnown RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 CCKBRP32239 447 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 CTHP32929 405 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms