RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 CLEC4AQ9UMR7 237 aa15.65■□□□□ 0.1
SSH3-201ENST00000308127 MAPRE3Q9UPY8 281 aa15.65■□□□□ 0.1
SSH3-201ENST00000308127 LILRB5O75023 590 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 ALDH1A1P00352 501 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 CHRM4P08173 479 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 NR2F6P10588 404 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 ENDOUP21128 410 aaKnown RBP15.64■□□□□ 0.09
SSH3-201ENST00000308127 BSGP35613 385 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 DCDC1P59894 354 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.64■□□□□ 0.09
SSH3-201ENST00000308127 ASAH1Q13510 395 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 XKRXQ6PP77 449 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 PRICKLE2Q7Z3G6 844 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 MARCH9Q86YJ5 346 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 C19orf18Q8NEA5 215 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 JPH3Q8WXH2 748 aaPredicted RBP15.64■□□□□ 0.09
SSH3-201ENST00000308127 UPRTQ96BW1 309 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 SENP5Q96HI0 755 aaPredicted RBP15.64■□□□□ 0.09
SSH3-201ENST00000308127 SAP130Q9H0E3 1048 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 DIMT1Q9UNQ2 313 aaKnown RBP15.64■□□□□ 0.09
SSH3-201ENST00000308127 CLCA2Q9UQC9 943 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 CHD9Q3L8U1 2897 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 ISM1B1AKI9 464 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 SPINT1O43278 529 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 YES1P07947 543 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 NNMTP40261 264 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 DUSP2Q05923 314 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 CAMK2BQ13554 666 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 TMEM201Q5SNT2 666 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 ZNF57Q68EA5 555 aaPredicted RBP15.64■□□□□ 0.09
SSH3-201ENST00000308127 C12orf40Q86WS4 652 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 HOMEZQ8IX15 550 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 SMAP2Q8WU79 429 aaPredicted RBP15.64■□□□□ 0.09
SSH3-201ENST00000308127 MCUBQ9NWR8 336 aa15.64■□□□□ 0.09
SSH3-201ENST00000308127 FAM240BA0A1B0GVZ2 78 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 LIMS3P0CW19 117 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 LIMS4P0CW20 117 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 CHRNB1P11230 501 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 CPEP16870 476 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 GPR4P46093 362 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 CLDN2P57739 230 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 DPPA4Q7L190 304 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 DGLUCYQ7Z3D6 616 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 CCDC116Q8IYX3 515 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 RDH10Q8IZV5 341 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 OR5P2Q8WZ92 322 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 SNAPC3Q92966 411 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 SLC35G5Q96KT7 338 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 WDFY2Q96P53 400 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 ZNF607Q96SK3 696 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 GLIPR2Q9H4G4 154 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 A4GALTQ9NPC4 353 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 TESQ9UGI8 421 aaKnown RBP15.63■□□□□ 0.09
SSH3-201ENST00000308127 CSNK1G3Q9Y6M4 447 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 DENND4CQ5VZ89 1909 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 NOTCH4Q99466 2003 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 SLC30A4O14863 429 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 GNSP15586 552 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 PCSK2P16519 638 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 DDX5P17844 614 aaKnown RBP15.63■□□□□ 0.09
SSH3-201ENST00000308127 FUT1P19526 365 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 ATP6V1E1P36543 226 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 RPL3P39023 403 aaKnown RBP15.63■□□□□ 0.09
SSH3-201ENST00000308127 MAP2K3P46734 347 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 NCBP2P52298 156 aaKnown RBP eCLIP15.63■□□□□ 0.093e-6■■■■■ 31.5
SSH3-201ENST00000308127 ELOAQ14241 798 aaKnown RBP15.63■□□□□ 0.09
SSH3-201ENST00000308127 BTBD16Q32M84 506 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 PIP5KL1Q5T9C9 394 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 LCN1P1Q5VSP4 162 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 C17orf64Q86WR6 236 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 FAM129CQ86XR2 697 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 REM2Q8IYK8 340 aaPredicted RBP15.63■□□□□ 0.09
SSH3-201ENST00000308127 TMEM145Q8NBT3 493 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 KREMEN2Q8NCW0 462 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 PCNPQ8WW12 178 aaKnown RBP15.63■□□□□ 0.09
SSH3-201ENST00000308127 DTD2Q96FN9 168 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 GDF15Q99988 308 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 KLHL31Q9H511 634 aa15.63■□□□□ 0.09
SSH3-201ENST00000308127 A0A087WUU8 490 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 IL1AP01583 271 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 MTNR1AP48039 350 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 GAS1P54826 345 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 ZNF730Q6ZMV8 503 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 VRK2Q86Y07 508 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 TBC1D19Q8N5T2 526 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 TFGQ92734 400 aaPredicted RBP15.62■□□□□ 0.09
SSH3-201ENST00000308127 MSLNLQ96KJ4 702 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 TEFMQ96QE5 360 aaKnown RBP15.62■□□□□ 0.09
SSH3-201ENST00000308127 AP1M2Q9Y6Q5 423 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 COL4A6Q14031 1691 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 FAM25AB3EWG3 89 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 FAM25CB3EWG5 89 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 FAM25GB3EWG6 89 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 PGRMC2O15173 223 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 RB1P06400 928 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 SRPRAP08240 638 aaKnown RBP15.62■□□□□ 0.09
SSH3-201ENST00000308127 C6P13671 934 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 EVI2BP34910 448 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 WSCD2Q2TBF2 565 aa15.62■□□□□ 0.09
SSH3-201ENST00000308127 YIF1BQ5BJH7 314 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms