RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 DOLKQ9UPQ8 538 aa10.69□□□□□ -0.7
SCG2-201ENST00000305409 PCDHGA10Q9Y5H3 936 aa10.69□□□□□ -0.7
SCG2-201ENST00000305409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 NPIPA5A0A0B4J1W7 369 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 CENPVL1A0A0U1RR11 272 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 OR5K3A6NET4 321 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 NPIPA7E9PJI5 369 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 PDE9AO76083 593 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 MED26O95402 600 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 NPIPA8P0DM63 369 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 ZNF182P17025 639 aaPredicted RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 POU3F3P20264 500 aaPredicted RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 ELAVL4P26378 380 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 AVPR1BP47901 424 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 RFX3P48380 749 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 SLC35A2P78381 396 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 RPL6Q02878 288 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 EXOSC7Q15024 291 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 PTGES3Q15185 160 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 SMAD2Q15796 467 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 NKAIN2Q5VXU1 208 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 GTF2IRD2BQ6EKJ0 949 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 ARMC6Q6NXE6 501 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 ZC3H14Q6PJT7 736 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 ABHD13Q7L211 337 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 C16orf62Q7Z3J2 963 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 BCDIN3DQ7Z5W3 292 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 GTF2IRD2Q86UP8 949 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 OOSP2Q86WS3 158 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 SLC30A8Q8IWU4 369 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 OR56A1Q8NGH5 318 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 FAR1Q8WVX9 515 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 IL4I1Q96RQ9 567 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 MAP3K3Q99759 626 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 SLC38A1Q9H2H9 487 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 C3orf14Q9HBI5 128 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 PRDM6Q9NQX0 595 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 ZNF226Q9NYT6 803 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 A4GNTQ9UNA3 340 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 COLQQ9Y215 455 aaPredicted RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 KIR2DS5A0A0G2JLQ3 304 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 A0A0G2JNG1 304 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 KIR2DS3K7RE56 304 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 SEC14L2O76054 403 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 LCKP06239 509 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 H1F0P07305 194 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 CCDC159P0C7I6 412 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 NT5EP21589 574 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 CBLP22681 906 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 CHMP24386 653 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 DCKP27707 260 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 GGT2P36268 569 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 CTSKP43235 329 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 RXRGP48443 463 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 CSNK1EP49674 416 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 MAT1AQ00266 395 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 KIR2DS5Q14953 304 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 SYT16Q17RD7 645 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 ZNF311Q5JNZ3 666 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 DCST1Q5T197 706 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 KRT73Q86Y46 540 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 ERI1Q8IV48 349 aaKnown RBP10.68□□□□□ -0.7
SCG2-201ENST00000305409 P3H2Q8IVL5 708 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 CLIP4Q8N3C7 705 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 IQCF1Q8N6M8 205 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 ADAMTS15Q8TE58 950 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 HSPA12BQ96MM6 686 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 PITX2Q99697 317 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 FUNDC2Q9BWH2 189 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 OCEL1Q9H607 264 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 FBXO34Q9NWN3 711 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 SCN3BQ9NY72 215 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 GPR83Q9NYM4 423 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 HCN3Q9P1Z3 774 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 TMCC3Q9ULS5 477 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 POFUT2Q9Y2G5 429 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 SLC22A7Q9Y694 548 aa10.68□□□□□ -0.7
SCG2-201ENST00000305409 A0A0A6YYC8 382 aaPredicted RBP10.67□□□□□ -0.7
SCG2-201ENST00000305409 I3L1I5 382 aaPredicted RBP10.67□□□□□ -0.7
SCG2-201ENST00000305409 DCNP07585 359 aaKnown RBP10.67□□□□□ -0.7
SCG2-201ENST00000305409 CT62P0C5K7 136 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 CPMP14384 443 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 TNNI3P19429 210 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 PSMB9P28065 219 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 CD38P28907 300 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 MAN2A2P49641 1150 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 HMGA2P52926 109 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 TARDBPQ13148 414 aaKnown RBP eCLIP10.67□□□□□ -0.7
SCG2-201ENST00000305409 TOP3AQ13472 1001 aaPredicted RBP10.67□□□□□ -0.7
SCG2-201ENST00000305409 ZNF770Q6IQ21 691 aaPredicted RBP10.67□□□□□ -0.7
SCG2-201ENST00000305409 PODNL1Q6PEZ8 512 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 BHLHB9Q6PI77 547 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 TMEM64Q6YI46 380 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 DGAT2L6Q6ZPD8 337 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 ARL14Q8N4G2 192 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 PIK3R3Q92569 461 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 HLA-CQ95604 372 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 GPA33Q99795 319 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 IRAK4Q9NWZ3 460 aa10.67□□□□□ -0.7
SCG2-201ENST00000305409 UCKL1Q9NWZ5 548 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms