RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 FCRL3Q96P31 734 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 TLR9Q9NR96 1032 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 F8W036 122 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 VSX2P58304 361 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 KLBQ86Z14 1044 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 OR6N1Q8NGY5 312 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TMEM125Q96AQ2 219 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 DDIT4LQ96D03 193 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 FBRSQ9HAH7 460 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 HMX3A6NHT5 357 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SLC31A1O15431 190 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 USP2O75604 605 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 PNMTP11086 282 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 HLA-EP13747 358 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 PYCR1P32322 319 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 EVX2Q03828 476 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 APOFQ13790 326 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF704Q6ZNC4 412 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 LRP10Q7Z4F1 713 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TSTD1Q8NFU3 115 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 BORCS7Q96B45 105 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 KCTD12Q96CX2 325 aaKnown RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ELP4Q96EB1 424 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TWNKQ96RR1 684 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF395Q9H8N7 513 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 LRFN1Q9P244 771 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 C9IYK1 514 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 STSP08842 583 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 HOXD12P35452 270 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 OPRL1P41146 370 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 CLDN10P78369 228 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TMEM164Q5U3C3 297 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SHFQ7M4L6 423 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 CPNE8Q86YQ8 564 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SIMC1Q8NDZ2 872 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TMEM68Q96MH6 324 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 DHRS4Q9BTZ2 278 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ACTRT3Q9BYD9 372 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ANKMY1Q9P2S6 941 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SIX4Q9UIU6 781 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 PIRO00625 290 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SYNGR4O95473 234 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 CSTAP01040 98 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ASGR2P07307 311 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 MAGEA6P43360 314 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 INHBCP55103 352 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 MC2RQ01718 297 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TAP2Q03519 686 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 GRM2Q14416 872 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 RSU1Q15404 277 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 LRRC73Q5JTD7 316 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 PRSS55Q6UWB4 352 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ENPP7Q6UWV6 458 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TPRA1Q86W33 373 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 GLIS1Q8NBF1 620 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 DCAF13Q9NV06 445 aaKnown RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 RHCGQ9UBD6 479 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 PCTPQ9UKL6 214 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF16P17020 682 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TAS2R38P59533 333 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SLAMF1Q13291 335 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 GPR17Q13304 367 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 CEACAM7Q14002 265 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 GRB7Q14451 532 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TBCEQ15813 527 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 RBM23Q86U06 439 aaKnown RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 RASGRP3Q8IV61 690 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 C7orf34Q96L11 122 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ALG8Q9BVK2 526 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SLC2A4RGQ9NR83 387 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SLC6A5Q9Y345 797 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 CLDN24A6NM45 220 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 PLATP00750 562 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TYRP14679 529 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 PGCP20142 388 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 FGL2Q14314 439 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 LRIT3Q3SXY7 679 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 KRBOX4Q5JUW0 171 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 NXPE4Q6UWF7 544 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 IFNL1Q8IU54 200 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 CMTM1Q8IZ96 169 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TRIB2Q92519 343 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TGM7Q96PF1 710 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ASF1BQ9NVP2 202 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 GPATCH2Q9NW75 528 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TEX10Q9NXF1 929 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TCRBV3S1A0A5B6 114 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 IL1AP01583 271 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 MMP2P08253 660 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 UBL4AP11441 157 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 FOSL1P15407 271 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF43P17038 809 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 GDF5P43026 501 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 KIAA0319Q5VV43 1072 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 Q6ZVU0 165 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 MAMDC2Q7Z304 686 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 VTCN1Q7Z7D3 282 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SLC41A3Q96GZ6 507 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ENPP4Q9Y6X5 453 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms