RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 WBP11Q9Y2W2 641 aaKnown RBP16.78■□□□□ 0.28
SPSB3-201ENST00000301717 NPFFR2Q9Y5X5 522 aa16.78■□□□□ 0.28
SPSB3-201ENST00000301717 CDK2AP1O14519 115 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 ABCD3P28288 659 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 CDK9P50750 372 aaKnown RBP16.77■□□□□ 0.27
SPSB3-201ENST00000301717 ELOAQ14241 798 aaKnown RBP16.77■□□□□ 0.27
SPSB3-201ENST00000301717 TAGAPQ8N103 731 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 FAM98AQ8NCA5 519 aaKnown RBP16.77■□□□□ 0.27
SPSB3-201ENST00000301717 TP53INP1Q96A56 240 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 VSTM2LQ96N03 204 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 FOLH1BQ9HBA9 442 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 PROK2Q9HC23 129 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 SACM1LQ9NTJ5 587 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 ZNF446Q9NWS9 450 aa16.77■□□□□ 0.27
SPSB3-201ENST00000301717 CHCHD2Q9Y6H1 151 aaPredicted RBP16.77■□□□□ 0.27
SPSB3-201ENST00000301717 FLNBO75369 2602 aaKnown RBP16.77■□□□□ 0.27
SPSB3-201ENST00000301717 KLRC4-KLRK1H3BQV0 150 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 UPK1AO00322 258 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 SCAMP2O15127 329 aaKnown RBP16.76■□□□□ 0.27
SPSB3-201ENST00000301717 LAMP1P11279 417 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 ASMTP46597 345 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 OCRLQ01968 901 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 NTRK2Q16620 822 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 FAM47EQ6ZV65 393 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 SLC15A4Q8N697 577 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 ZFP62Q8NB50 900 aaPredicted RBP16.76■□□□□ 0.27
SPSB3-201ENST00000301717 GOLM1Q8NBJ4 401 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 OR52N2Q8NGI0 321 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 PAQR8Q8TEZ7 354 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 ZNF75CPQ92670 426 aaPredicted RBP16.76■□□□□ 0.27
SPSB3-201ENST00000301717 ELP4Q96EB1 424 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 LCORQ96JN0 433 aaPredicted RBP16.76■□□□□ 0.27
SPSB3-201ENST00000301717 SGCZQ96LD1 299 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 WDR55Q9H6Y2 383 aaPredicted RBP16.76■□□□□ 0.27
SPSB3-201ENST00000301717 VIPAS39Q9H9C1 493 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 THAP1Q9NVV9 213 aa16.76■□□□□ 0.27
SPSB3-201ENST00000301717 TUBA8Q9NY65 449 aaPredicted RBP16.76■□□□□ 0.27
SPSB3-201ENST00000301717 CNOT11Q9UKZ1 510 aaKnown RBP16.76■□□□□ 0.27
SPSB3-201ENST00000301717 GOLGA8QA0A0J9YX86 632 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 GOLGA8OA6NCC3 632 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 GOLGA8NF8WBI6 632 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 SDHDO14521 159 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 TFECO14948 347 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-201ENST00000301717 PLOD3O60568 738 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 PDE9AO76083 593 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 P04436 131 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 CT45A8P0DMV1 189 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 CT45A9P0DMV2 189 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 CNR1P21554 472 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 MAPK1P28482 360 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 HPCAL1P37235 193 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 PLGLB1Q02325 96 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 EMX2Q04743 252 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 PLCXD2Q0VAA5 305 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 FOXO1Q12778 655 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 ZNF155Q12901 538 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-201ENST00000301717 CT45A2Q5DJT8 189 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 SLC22A10Q63ZE4 541 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 MAVSQ7Z434 540 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 ZGRF1Q86YA3 2104 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 OR4N2Q8NGD1 307 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 OMA1Q96E52 524 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 GPR137Q96N19 417 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 DDX18Q9NVP1 670 aaKnown RBP16.75■□□□□ 0.27
SPSB3-201ENST00000301717 PRODH2Q9UF12 536 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 ATP6V1HQ9UI12 483 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 SH3BGRL2Q9UJC5 107 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 ERRFI1Q9UJM3 462 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-201ENST00000301717 CFL2Q9Y281 166 aa16.75■□□□□ 0.27
SPSB3-201ENST00000301717 GPR55Q9Y2T6 319 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-201ENST00000301717 PTPN13Q12923 2485 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 CLEC18AA5D8T8 446 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 CDC40O60508 579 aaKnown RBP eCLIP16.74■□□□□ 0.27
SPSB3-201ENST00000301717 TBX19O60806 448 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 ERN1O75460 977 aaKnown RBP16.74■□□□□ 0.27
SPSB3-201ENST00000301717 CELA3AP09093 270 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 PRPS2P11908 318 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 EPHA3P29320 983 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 PPICP45877 212 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 NRG3P56975 720 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 RPS6KA2Q15349 733 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 CMPK2Q5EBM0 449 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 C1QL3Q5VWW1 255 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 ATG16L1Q676U5 607 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 CLEC18BQ6UXF7 455 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 FGD2Q7Z6J4 655 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 WDR75Q8IWA0 830 aaKnown RBP16.74■□□□□ 0.27
SPSB3-201ENST00000301717 CHERPQ8IWX8 916 aaKnown RBP16.74■□□□□ 0.27
SPSB3-201ENST00000301717 GOLGA6L1Q8N7Z2 621 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 CLEC18CQ8NCF0 446 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 FBXO30Q8TB52 745 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 DIO2Q92813 273 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 TMBIM1Q969X1 311 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 TTTY12Q9BZ98 90 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 DEFB127Q9H1M4 99 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 MEAF6Q9HAF1 191 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 EQTNQ9NQ60 294 aa16.74■□□□□ 0.27
SPSB3-201ENST00000301717 C19orf53Q9UNZ5 99 aaPredicted RBP16.74■□□□□ 0.27
SPSB3-201ENST00000301717 EIF3LQ9Y262 564 aaKnown RBP16.74■□□□□ 0.27
SPSB3-201ENST00000301717 SPTAN1Q13813 2472 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms