RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ACSS1Q9NUB1 689 aaPredicted RBP12.16□□□□□ -0.46
HIF3A-204ENST00000300862 CFL2Q9Y281 166 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 GPR52Q9Y2T5 361 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 NUP210Q8TEM1 1887 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-204ENST00000300862 EYSQ5T1H1 3165 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 LINC00854A0A1B0GVQ3 168 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 LOC110117498-PIK3R3F6TDL0 507 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 H3BQ06 376 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-204ENST00000300862 PPP2R1BP30154 601 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 TNFSF8P32971 234 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 MLLT1Q03111 559 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-204ENST00000300862 TIMM50Q3ZCQ8 353 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 ZMAT1Q5H9K5 638 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 KRT73Q86Y46 540 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 GATAD2AQ86YP4 633 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 UBQLNLQ8IYU4 475 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 HDDC3Q8N4P3 179 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 LRR1Q96L50 414 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 PCBD2Q9H0N5 130 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 SPHK1Q9NYA1 384 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 ACAD8Q9UKU7 415 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 TBC1D24Q9ULP9 559 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 KNL1Q8NG31 2342 aa12.15□□□□□ -0.46
HIF3A-204ENST00000300862 PDZK1P1A8MUH7 402 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 MAN2B1O00754 1011 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 NARSO43776 548 aaKnown RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 TPPPO94811 219 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 PIPP12273 146 aaPredicted RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 AZGP1P25311 298 aaKnown RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 CERS1P27544 350 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 MAT2AP31153 395 aaKnown RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 HSD17B2P37059 387 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 ETV6P41212 452 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 CRYBB2P43320 205 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 GSTM5P46439 218 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 PSRC1Q6PGN9 363 aaPredicted RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 SHFQ7M4L6 423 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 CCDC190Q86UF4 302 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 OR8H2Q8N162 312 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 ASCC1Q8N9N2 400 aaKnown RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 TMEM145Q8NBT3 493 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 FCRL4Q96PJ5 515 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 SLC6A20Q9NP91 592 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 NPAP1Q9NZP6 1156 aa12.15□□□□□ -0.47
HIF3A-204ENST00000300862 ZFR2Q9UPR6 939 aaKnown RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 YARS2Q9Y2Z4 477 aaKnown RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 RPL36Q9Y3U8 105 aaKnown RBP12.15□□□□□ -0.47
HIF3A-204ENST00000300862 MDC1Q14676 2089 aaKnown RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 A0A1W2PRQ8 180 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 A8MV72 311 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 PLD2O14939 933 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 KAT7O95251 611 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 GJA4P35212 333 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 ETV5P41161 510 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 GIPRP48546 466 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 ETV1P50549 477 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 RAB28P51157 221 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 DEFA1P59665 94 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 DEFA3P59666 94 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SNRPNP63162 240 aaKnown RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 RHAGQ02094 409 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 HYAL2Q12891 473 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SLC9A5Q14940 896 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 PDGFRLQ15198 375 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 CST6Q15828 149 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SYT14P1Q58G82 188 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 TMEM201Q5SNT2 666 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 OR2G6Q5TZ20 316 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 KIAA1161Q6NSJ0 714 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 ZNF544Q6NX49 715 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 ACOT4Q8N9L9 421 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SUN3Q8TAQ9 357 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 GPR151Q8TDV0 419 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 GANCQ8TET4 914 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 RAB7BQ96AH8 199 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SNX18Q96RF0 628 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SLC30A2Q9BRI3 323 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 TEX101Q9BY14 249 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SLC6A17Q9H1V8 727 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 MRPS30Q9NP92 439 aaKnown RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 THAP10Q9P2Z0 257 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 NDOR1Q9UHB4 597 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 GPR55Q9Y2T6 319 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 WBP11Q9Y2W2 641 aaKnown RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 GPSM3Q9Y4H4 160 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 STON1Q9Y6Q2 735 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 A0A0C4DFX4 3053 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 MYL12BO14950 172 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 CLEC3AO75596 197 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SNX4O95219 450 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 PSMA1P25786 263 aaKnown RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 NTSP30990 170 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 KRR1Q13601 381 aaKnown RBP12.14□□□□□ -0.47
HIF3A-204ENST00000300862 NCF4Q15080 339 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 SNAPC1Q16533 368 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 FLYWCH1Q4VC44 716 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 CLEC12AQ5QGZ9 265 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 ATAT1Q5SQI0 421 aa12.14□□□□□ -0.47
HIF3A-204ENST00000300862 USP30Q70CQ3 517 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms