RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 MLLT11Q13015 90 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 FAM27D1Q5T7N8 215 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 TMEM81Q6P7N7 255 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ZNF730Q6ZMV8 503 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 GPR155Q7Z3F1 870 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 TEX26Q8N6G2 289 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 OR52I1Q8NGK6 324 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 MOSPD2Q8NHP6 518 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 DDOQ99489 341 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 EGLN3Q9H6Z9 239 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 IL23AQ9NPF7 189 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 PRDM9Q9NQV7 894 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 IQCMA0A1B0GVH7 501 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 TCRBV16S1A1N1A0A5B0 115 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 SCAMP2O15127 329 aaKnown RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 PROM1O43490 865 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 SLC43A1O75387 559 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 CXCL14O95715 111 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 MRPL3P09001 348 aaKnown RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ACSL1P33121 698 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 GDPGP1Q6ZNW5 385 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 LINGO2Q7L985 606 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 VRK3Q8IV63 474 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 MMP21Q8N119 569 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 OR11H4Q8NGC9 324 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 METTL2AQ96IZ6 378 aaKnown RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 MTIF3Q9H2K0 278 aaKnown RBP14.07□□□□□ -0.16
SPIDR-201ENST00000297423 CAPN10Q9HC96 672 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 CNIH4Q9P003 139 aa14.07□□□□□ -0.16
SPIDR-201ENST00000297423 ARPC5O15511 151 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 LANCL1O43813 399 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 OR5F1O95221 314 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 EPHX1P07099 455 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 STK19P49842 368 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 TEKQ02763 1124 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 GLYR1Q49A26 553 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 SYT9Q86SS6 491 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 OR6M1Q8NGM8 313 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 TMEM159Q96B96 161 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 COPS3Q9UNS2 423 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 HLA-DPB1P04440 258 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CLDN20P56880 219 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 ERVK-21P61565 698 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 HYAL4Q2M3T9 481 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CDKL4Q5MAI5 379 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 PRSS45Q7RTY3 260 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 DNAJB7Q7Z6W7 309 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 DDX53Q86TM3 631 aaKnown RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 THOC6Q86W42 341 aaKnown RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CACUL1Q86Y37 369 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 SYNPOQ8N3V7 929 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 NANOGP1Q8N7R0 232 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 GCDHQ92947 438 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CLP1Q92989 425 aaKnown RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 SLC38A2Q96QD8 506 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 MGME1Q9BQP7 344 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 TEX12Q9BXU0 123 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CACYBPQ9HB71 228 aaKnown RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 TMEM5Q9Y2B1 443 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 SHOXO15266 292 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CHP2O43745 196 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 KHDRBS3O75525 346 aaKnown RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 ERAL1O75616 437 aaKnown RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 FGF18O76093 207 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CKMP06732 381 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 SRPRAP08240 638 aaKnown RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 H2AFB2P0C5Z0 115 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 MSL3P1P0C860 447 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CTRB1P17538 263 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 PTX3P26022 381 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CCR7P32248 378 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 SGSHP51688 502 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CTRB2Q6GPI1 263 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 KRT78Q8N1N4 520 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 GIMAP1Q8WWP7 306 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 TEFMQ96QE5 360 aaKnown RBP14.06□□□□□ -0.16
SPIDR-201ENST00000297423 OR4K3Q96R72 315 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 RAD9AQ99638 391 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 GAL3ST1Q99999 423 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 TMEM43Q9BTV4 400 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 TMEM45AQ9NWC5 275 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 FLVCR2Q9UPI3 526 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 RASD1Q9Y272 281 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 CACNG2Q9Y698 323 aa14.06□□□□□ -0.16
SPIDR-201ENST00000297423 BPIP17213 487 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 SPAM1P38567 509 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 BLVRAP53004 296 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 RING1Q06587 406 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 ELP2Q6IA86 826 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 SLC30A6Q6NXT4 461 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 GPR135Q8IZ08 494 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 HUS1BQ8NHY5 278 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 SCAMP4Q969E2 229 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 ARL6Q9H0F7 186 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 ZDHHC6Q9H6R6 413 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 MGAT4CQ9UBM8 478 aa14.05□□□□□ -0.16
SPIDR-201ENST00000297423 LSM7Q9UK45 103 aaKnown RBP14.05□□□□□ -0.16
SPIDR-201ENST00000297423 PADI2Q9Y2J8 665 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms