RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SRPX2O60687 465 aaPredicted RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 RECKO95980 971 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 EMP3P54852 163 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 CSNK2BP67870 215 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 EXOSC6Q5RKV6 272 aaKnown RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 GPR107Q5VW38 600 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 DEF8Q6ZN54 512 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 B3GNT8Q7Z7M8 397 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 OR9Q2Q8NGE9 314 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 VANGL1Q8TAA9 524 aaPredicted RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 OTUB1Q96FW1 271 aaPredicted RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 ZC3H10Q96K80 434 aaKnown RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 NIPSNAP1Q9BPW8 284 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 NMNAT1Q9HAN9 279 aaPredicted RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 CCNB1IP1Q9NPC3 277 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 EQTNQ9NQ60 294 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 RASSF1Q9NS23 344 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 RLIMQ9NVW2 624 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 RHCGQ9UBD6 479 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 DOLKQ9UPQ8 538 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 RNF215Q9Y6U7 377 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 A0A1B0GVT2 93 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 A0A1W2PS29 197 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 H3BMH7 237 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 CYR61O00622 381 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 XPNPEP2O43895 674 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 TYRP1P17643 537 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 FMO3P31513 532 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 GPR3P46089 330 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 SIM1P81133 766 aaPredicted RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 DYNC1I2Q13409 638 aaKnown RBP8.58□□□□□ -1.04
PDPN-201ENST00000294489 DEFB133Q30KQ1 61 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 FGD3Q5JSP0 725 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 DCST1Q5T197 706 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 LYSMD4Q5XG99 296 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 TCTN3Q6NUS6 607 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 TSSK4Q6SA08 328 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 FAM92BQ6ZTR7 304 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 USP53Q70EK8 1073 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 DEPDC4Q8N2C3 294 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 CSNK1A1LQ8N752 337 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 OR13F1Q8NGS4 319 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 ADAMTS15Q8TE58 950 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 KAT2AQ92830 837 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 C16orf58Q96GQ5 468 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 OR7D2Q96RA2 312 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 ACTRT3Q9BYD9 372 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 PCDHGA6Q9Y5G7 932 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 NUP210LQ5VU65 1888 aa8.58□□□□□ -1.04
PDPN-201ENST00000294489 TLCD2A6NGC4 264 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 CASC3O15234 703 aaKnown RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 DNAJB6O75190 326 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 AGR2O95994 175 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 H1F0P07305 194 aaKnown RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 CHRM4P08173 479 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 DCKP27707 260 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 SOX18P35713 384 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 GGT2P36268 569 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 MAN2A2P49641 1150 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 HPCAP84074 193 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 SQSTM1Q13501 440 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 XAF1Q6GPH4 301 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 C16orf62Q7Z3J2 963 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 MCATQ8IVS2 390 aaKnown RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 CA13Q8N1Q1 262 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 PARP8Q8N3A8 854 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 AQP11Q8NBQ7 271 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 ZNF540Q8NDQ6 660 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 MS4A4EQ96PG1 132 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 SLC38A3Q99624 504 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 TRIM45Q9H8W5 580 aaPredicted RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 TMEM74BQ9NUR3 256 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 TMEM9Q9P0T7 183 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 SLC13A4Q9UKG4 626 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 CDC14AQ9UNH5 594 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 NAALAD2Q9Y3Q0 740 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 SLC9B1P1A6NJY1 282 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 E9PQ18 207 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 FFAR1O14842 300 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 MRPS14O60783 128 aaKnown RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 FAM20BO75063 409 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 UGT2B17O75795 530 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 SEC14L2O76054 403 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 OXSR1O95747 527 aaPredicted RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 MSL3P1P0C860 447 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 POU2F1P14859 743 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 PNLIPP16233 465 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 PORP16435 677 aaPredicted RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 CDH3P22223 829 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 GCGRP47871 477 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 VSX2P58304 361 aaPredicted RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 LTB4RQ15722 352 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 PLK5Q496M5 336 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 NIPAL1Q6NVV3 410 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 MED25Q71SY5 747 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 FAM81AQ8TBF8 368 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 IPCEF1Q8WWN9 437 aaPredicted RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 SGCDQ92629 289 aa8.57□□□□□ -1.04
PDPN-201ENST00000294489 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
PDPN-201ENST00000294489 C12orf43Q96C57 262 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms