RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 MS4A12Q9NXJ0 267 aa15.82■□□□□ 0.12
CPSF4-201ENST00000292476 DMXL1Q9Y485 3027 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 M0R3G1 203 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 PCDHGA12O60330 932 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 SRPX2O60687 465 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-201ENST00000292476 CTSVO60911 334 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 NTRK1P04629 796 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 CFIP05156 583 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 ETFAP13804 333 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 GLB1P16278 677 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 PPM1FP49593 454 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-201ENST00000292476 HMGA2P52926 109 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 MLLT10P55197 1068 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 PCBP3P57721 371 aaKnown RBP15.81■□□□□ 0.12
CPSF4-201ENST00000292476 SKP1P63208 163 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 GPLD1P80108 840 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 MICAQ29983 383 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 TBC1D25Q3MII6 688 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 MRM1Q6IN84 353 aaKnown RBP15.81■□□□□ 0.12
CPSF4-201ENST00000292476 ZNF761Q86XN6 746 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-201ENST00000292476 C19orf47Q8N9M1 422 aaKnown RBP15.81■□□□□ 0.12
CPSF4-201ENST00000292476 OR10G2Q8NGC3 310 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 APH1BQ8WW43 257 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 MAL2Q969L2 176 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 ZBED6CLQ96FA7 236 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-201ENST00000292476 SERINC2Q96SA4 455 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 CHRNA10Q9GZZ6 450 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 NEUROD4Q9HD90 331 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 NLGN3Q9NZ94 848 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 LRIT1Q9P2V4 623 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 PHF11Q9UIL8 331 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 ADAMTS9Q9P2N4 1935 aa15.81■□□□□ 0.12
CPSF4-201ENST00000292476 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-201ENST00000292476 KHNYNO15037 678 aaKnown RBP15.8■□□□□ 0.12
CPSF4-201ENST00000292476 PDPK1O15530 556 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 TMPRSS11DO60235 418 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 HOXB3P14651 431 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-201ENST00000292476 UQCRC2P22695 453 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 PSMB9P28065 219 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 OPRL1P41146 370 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 MAP2K4P45985 399 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 ALDH9A1P49189 494 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 PRIM2P49643 509 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 CDK6Q00534 326 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 MC1RQ01726 317 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 COX20Q5RI15 118 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 NDUFAF5Q5TEU4 345 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 SLCO6A1Q86UG4 719 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 IGFN1Q86VF2 1251 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 SLC25A45Q8N413 288 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 DYNC2LI1Q8TCX1 351 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 OR5P2Q8WZ92 322 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 TAMM41Q96BW9 452 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 ACSS1Q9NUB1 689 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-201ENST00000292476 RHBDL2Q9NX52 303 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 GIN1Q9NXP7 522 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 PSORS1C1Q9UIG5 152 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 RNF6Q9Y252 685 aa15.8■□□□□ 0.12
CPSF4-201ENST00000292476 TDRD6O60522 2096 aaKnown RBP15.8■□□□□ 0.12
CPSF4-201ENST00000292476 A0A1B0GTQ1 180 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 LNP1A1A4G5 178 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 TLCD2A6NGC4 264 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 H0YGG7 62 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 MAGEB3O15480 346 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 FADS2O95864 444 aaKnown RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 OCM2P0CE71 109 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 OCMP0CE72 109 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 SMIM10L1P0DMW3 83 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 EPHA2P29317 976 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 CHI3L1P36222 383 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 BUD31P41223 144 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 XCR1P46094 333 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 LIMS1P48059 325 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 LSSP48449 732 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ARF3P61204 181 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 BTN3A2P78410 334 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 MLC1Q15049 377 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 MPEG1Q2M385 716 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ZNF793Q6ZN11 406 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ZNF438Q7Z4V0 828 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 SAMD14Q8IZD0 417 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 CENPSQ8N2Z9 138 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 OR8K5Q8NH50 307 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 RHOXF1Q8NHV9 184 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 NFKBIDQ8NI38 313 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 UTP15Q8TED0 518 aaKnown RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 SLC38A4Q969I6 547 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 SMIM10Q96HG1 83 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 FEVQ99581 238 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 PIP5K1AQ99755 562 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ITPAQ9BY32 194 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 AICDAQ9GZX7 198 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 EVA1BQ9NVM1 165 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ASB4Q9Y574 426 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 SPACA6W5XKT8 324 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 KPNA4O00629 521 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 DUX1O43812 170 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 B3GALT2O43825 422 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ZNF888P0CJ79 500 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 PNLIPP16233 465 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms