RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 LAMB1P07942 1786 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 SLC22A31A6NKX4 558 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 SOCS2O14508 198 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 LYRM1O43325 122 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PEX14O75381 377 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 SC5DO75845 299 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 TGM6O95932 706 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 AGXTP21549 392 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PREPP48147 710 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ZNF41P51814 821 aaPredicted RBP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 OR4D2P58180 307 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PLP2Q04941 152 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ZNF648Q5T619 568 aaPredicted RBP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 TMEM225Q6GV28 225 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 LACC1Q8IV20 430 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 MS4A15Q8N5U1 240 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 OR5H6Q8NGV6 325 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 SULT4A1Q9BR01 284 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ACTL8Q9H568 366 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PTGES2Q9H7Z7 377 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 GPR83Q9NYM4 423 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 TAS2R8Q9NYW2 309 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 AGPAT2O15120 278 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 BRINP1O60477 761 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 NR0B1P51843 470 aaKnown RBP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 CHRNEQ04844 493 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 GALNT2Q10471 571 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PAFAH1B3Q15102 231 aaKnown RBP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PPA1Q15181 289 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 SSX2Q16385 188 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 SGCAQ16586 387 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ARHGAP40Q5TG30 622 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 GPR139Q6DWJ6 353 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 TEX26Q8N6G2 289 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 GDPD1Q8N9F7 314 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 OR9A1PQ8NGU1 263 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 SUN3Q8TAQ9 357 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PTERQ96BW5 349 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ZNF597Q96LX8 424 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 HINT2Q9BX68 163 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 REV1Q9UBZ9 1251 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 CD300AQ9UGN4 299 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ICKQ9UPZ9 632 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 POLHQ9Y253 713 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 A0A1W2PQL4 384 aaPredicted RBP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 A0A1W2PRU2 124 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 C2orf74A8MZ97 194 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ATP6V1G2-DDX39BF2Z307 99 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 LILRB5O75023 590 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 BEST1O76090 585 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 SOX30O94993 753 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 MAS1P04201 325 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 GNB3P16520 340 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 CFL1P23528 166 aaKnown RBP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PCSK6P29122 969 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ZNF136P52737 540 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 AKR1C2P52895 323 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 EMP3P54852 163 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 HNRNPKP61978 463 aaKnown RBP eCLIP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 TRAM1L1Q8N609 369 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 GATSQ8NAP1 163 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 WDR20Q8TBZ3 569 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 OR5P2Q8WZ92 322 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 FAM46BQ96A09 425 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 MALSU1Q96EH3 234 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 NSUN5Q96P11 429 aaKnown RBP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 FEVQ99581 238 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 BCAS3Q9H6U6 928 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PLEKHA3Q9HB20 300 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 RPS10P5Q9NQ39 176 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 TMEM100Q9NV29 134 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PCTPQ9UKL6 214 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PLAGL1Q9UM63 463 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 CIB4A0PJX0 185 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 GRPRP30550 384 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ETV4P43268 484 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 KCNQ1P51787 676 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 CLRN1P58418 232 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ACTBP60709 375 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 ACTG1P63261 375 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 C14orf28Q4W4Y0 310 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 FAM209AQ5JX71 171 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 HMGN2P46Q86SG4 172 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 DCUN1D3Q8IWE4 304 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 OR4K14Q8NGD5 310 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 PXYLP1Q8TE99 480 aa10.25□□□□□ -0.77
PKNOX1-201ENST00000291547 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 PRKCAP17252 672 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 NFATC2Q13469 925 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 LRIF1Q5T3J3 769 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 SMYD5Q6GMV2 418 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 RPL13AP3Q6NVV1 102 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 GPR149Q86SP6 731 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 CYB5D2Q8WUJ1 264 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 SAMD11Q96NU1 681 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 ZNF442Q9H7R0 627 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 KLHL9Q9P2J3 617 aa10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 TNS1Q9HBL0 1735 aaKnown RBP10.24□□□□□ -0.77
PKNOX1-201ENST00000291547 CPED1A4D0V7 1026 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms