RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TMEM64Q6YI46 380 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NCCRP1Q6ZVX7 275 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 LIMS2Q7Z4I7 341 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 TMEM179BQ7Z7N9 219 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 OR8H3Q8N146 312 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MEIOBQ8N635 442 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SAMD12Q8N8I0 201 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ACOT4Q8N9L9 421 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CHDHQ8NE62 594 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 ABHD11Q8NFV4 315 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 OR52E2Q8NGJ4 325 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MOSPD2Q8NHP6 518 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CREB3L4Q8TEY5 395 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 OR5P2Q8WZ92 322 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 INSM2Q96T92 566 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 ZNF559Q9BR84 538 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NTMT1Q9BV86 223 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ACSL5Q9ULC5 683 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SH2B3Q9UQQ2 575 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FARSAQ9Y285 508 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 PEX16Q9Y5Y5 336 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SCN5AQ14524 2016 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MDC1Q14676 2089 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 A0A0A6YYC8 382 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 FUOMA2VDF0 154 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 I3L1I5 382 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 CHST10O43529 356 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MPZL2O60487 215 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 PPP1R3DO95685 299 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 PEX11BO96011 259 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ALPLP05186 524 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ZNF12P17014 697 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SDHBP21912 280 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CXCR1P25024 350 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CST5P28325 142 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 CRISP1P54107 249 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 HHEXQ03014 270 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 WSCD2Q2TBF2 565 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FAM26DQ5JW98 314 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 OR2G6Q5TZ20 316 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 OLFML2AQ68BL7 652 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ZNF676Q8N7Q3 588 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ZNF548Q8NEK5 533 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 TTLQ8NG68 377 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 OR4F15Q8NGB8 312 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CCL4L1Q8NHW4 92 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 KLHDC7BQ96G42 594 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MED28Q9H204 178 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NEK6Q9HC98 313 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SLC25A37Q9NYZ2 338 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ANKMY1Q9P2S6 941 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FBXL3Q9UKT7 428 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MEIS3P1A6NDR6 274 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ABLIM3O94929 683 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 C1QCP02747 245 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SRPRAP08240 638 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 CPMP14384 443 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NTSR1P30989 418 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 GJA4P35212 333 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 AHRP35869 848 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 TGM4P49221 684 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 APOFQ13790 326 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 IHHQ14623 411 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MOGQ16653 247 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NRROSQ86YC3 692 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 TMEM126BQ8IUX1 230 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SERPINA12Q8IW75 414 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FOXRED2Q8IWF2 684 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FAM83FQ8NEG4 500 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 OR4K5Q8NGD3 323 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NEIL3Q8TAT5 605 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 NELL2Q99435 816 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 APOBEC3BQ9UH17 382 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 FBXO9Q9UK97 447 aaPredicted RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 LAMA3Q16787 3333 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 A0A1B0GW55 424 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 TMEM150CB9EJG8 249 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 CCRL2O00421 344 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 PPM1DO15297 605 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 VEGFDO43915 354 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 ENTPD6O75354 484 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FBXO45P0C2W1 286 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 DUX4L2P0CJ85 424 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 DUX4L3P0CJ86 424 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 DUX4L4P0CJ87 422 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 DUX4L5P0CJ88 424 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 DUX4L6P0CJ89 424 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 DUX4L7P0CJ90 424 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 RHCEP18577 417 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 RPS3P23396 243 aaKnown RBP eCLIP4.53□□□□□ -1.68
UBR1-201ENST00000290650 SLC6A9P48067 706 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 RPL34P49207 117 aaKnown RBP4.53□□□□□ -1.68
UBR1-201ENST00000290650 DCDC1P59894 354 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SLC7A9P82251 487 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SLC14A1Q13336 389 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 GAB1Q13480 694 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 MICAQ29983 383 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 UGT3A2Q3SY77 523 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 SCGB2B2Q4G0G5 96 aa4.53□□□□□ -1.68
UBR1-201ENST00000290650 FIGLAQ6QHK4 219 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms