RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 SERPINA7P05543 415 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 PCSK2P16519 638 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 NCF2P19878 526 aaPredicted RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 CAPN3P20807 821 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 SSTR4P31391 388 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 GALNSP34059 522 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 CDK9P50750 372 aaKnown RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 RRADP55042 308 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 PER3P56645 1201 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 MAP4K2Q12851 820 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 EXOSC7Q15024 291 aaKnown RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 TERF2Q15554 542 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 SPRED3Q2MJR0 410 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 B3GNTL1Q67FW5 361 aaPredicted RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 FCRLBQ6BAA4 426 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 SPATA21Q7Z572 469 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 CAMKMTQ7Z624 323 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 GALNT12Q8IXK2 581 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 CLECL1Q8IZS7 167 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 MIER2Q8N344 545 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 GALNT16Q8N428 558 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 MORN4Q8NDC4 146 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 M1APQ8TC57 530 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 BRIX1Q8TDN6 353 aaKnown RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 ELP5Q8TE02 316 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 DAZLQ92904 295 aaKnown RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 CTHRC1Q96CG8 243 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 NPAS2Q99743 824 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 PELOQ9BRX2 385 aaKnown RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 DUSP26Q9BV47 211 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 LIN28AQ9H9Z2 209 aaKnown RBP12.35□□□□□ -0.43
PSMB4-201ENST00000290541 MMP25Q9NPA2 562 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 GIMAP4Q9NUV9 329 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 ZIM2Q9NZV7 527 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 ZNF639Q9UID6 485 aa12.35□□□□□ -0.43
PSMB4-201ENST00000290541 TRBV11-1A0A0K0K1C0 115 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 FAM221AA4D161 298 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 LRRTM2O43300 516 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 SNX3O60493 162 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 SHOX2O60902 331 aaPredicted RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 C6orf47O95873 294 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 CBX7O95931 251 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 SNRPB2P08579 225 aaKnown RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 NTSP30990 170 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 MPIP34949 423 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 RPL3P39023 403 aaKnown RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 MRPL19P49406 292 aaKnown RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 FUT7Q11130 342 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 HSPB3Q12988 150 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 EXT1Q16394 746 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 FAM174BQ3ZCQ3 159 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 TMEM107Q6UX40 140 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 C16orf47Q6ZP98 133 aaPredicted RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 CPLX4Q7Z7G2 160 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 ANKRD46Q86W74 232 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 PRIMA1Q86XR5 153 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 KBTBD2Q8IY47 623 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 FAM9CQ8IZT9 166 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 SIRT6Q8N6T7 355 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 CLEC1AQ8NC01 280 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 FDCSPQ8NFU4 85 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 OR7G2Q8NG99 324 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 OR1N1Q8NGS0 311 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 THAP3Q8WTV1 239 aaPredicted RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 TESCQ96BS2 214 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 VMP1Q96GC9 406 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 FBXL20Q96IG2 436 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 VPS50Q96JG6 964 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 MAGED4Q96JG8 741 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 BHLHE41Q9C0J9 482 aaPredicted RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 SIRT3Q9NTG7 399 aaPredicted RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 ASF1BQ9NVP2 202 aa12.34□□□□□ -0.43
PSMB4-201ENST00000290541 PCDHGA9Q9Y5G4 932 aaKnown RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 KLF2Q9Y5W3 355 aaPredicted RBP12.34□□□□□ -0.43
PSMB4-201ENST00000290541 FLNAP21333 2647 aaKnown RBP12.33□□□□□ -0.44
PSMB4-201ENST00000290541 A0A1W2PRB8 838 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 SYNDIG1LA6NDD5 238 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 A8MUI8 341 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 CEACAM4O75871 244 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 C1QCP02747 245 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 S100A3P33764 101 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 MC3RP41968 323 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 ATP4BP51164 291 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 POLR2JP52435 117 aaKnown RBP12.33□□□□□ -0.44
PSMB4-201ENST00000290541 CLNS1AP54105 237 aaKnown RBP12.33□□□□□ -0.44
PSMB4-201ENST00000290541 MANFP55145 182 aaKnown RBP12.33□□□□□ -0.44
PSMB4-201ENST00000290541 SLC37A1P57057 533 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 SOX8P57073 446 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 SQLEQ14534 574 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 AGKQ53H12 422 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 SLC6A19Q695T7 634 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 PIGWQ7Z7B1 504 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 C9orf40Q8IXQ3 194 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 SAMD14Q8IZD0 417 aaPredicted RBP12.33□□□□□ -0.44
PSMB4-201ENST00000290541 VWA5B2Q8N398 1253 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 CPSF7Q8N684 471 aaKnown RBP12.33□□□□□ -0.44
PSMB4-201ENST00000290541 ZNF615Q8N8J6 731 aa12.33□□□□□ -0.44
PSMB4-201ENST00000290541 OR52R1Q8NGF1 315 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms